Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10304g00001 ATGGCCAAAAAATCACAGCTGCGAACCCAGAAAAACAATGCAACCAATGACAACATTCTTAACACCACCAACACTGTCACCACCAAGGTCAAACGAACAAGGAGAAGTGTCCCTAGAGATTCCCCTCCTCAACGTAGCTCAATATACCGAGGAGTCACTAGGCACCGATGGACAGGTCGATACGAAGCTCATTTGTGGGACAAGCATTGCTGGAATGAGTCTCAAAAGAAGAAAGGACGACAAGGAGCTTATGACAATGAAGAGGCGGCAGCACATGCTTATGATCTAGCAGCACTGAAATATTGGGGTCAAGATACCATTCTTAATTTTCCGTTATCCAACTACCTGAACGAACTGAAAGAAATGGAGGGTCAATCACGGGAGGAATATATCGGATCGCTGAGGAGGAAAAGCAGTGGTTTTTCTCGGGGAATTTCTAAATACAGAGGTGTTGCAAGACATCATCATAACGGAAGGTGGGAAGCTCGGATTGGCAAAGTTTTTGGCAATAAATATCTTTATCTCGGAACTTACGCTACCCAAGAAGAAGCTGCTACGGCTTACGACCTGGCAGCCATAGAATACCGTGGACTCAATGCTGTCACGAATTTCGATCTCAGCCGTTATATTAAGTGGCTTAAGCCCAACAACATGAACAATAATAATGACCAGATTAGTATTAATCTTACTCCCATAAATCATAATTGTAGTAGCAACTTCACCCCACACCCCAACCAAGAACAAGAATTAAGCTTATTACACAACCAGGATTCGCTCAATAGTATCGTGGAAGAAGCCACGTTGGTGCCACATCAGCCTCGTCCAGCAGGTGCCACGTCAGCATTGGAGCTTCTACTTCAGTCATCCAAGTTCAAGGAAATGATGGAGATGACATCTGTGGCCAATCTGTCAACACAGCTGGAGTCTGAGTTGCCACAGTGCACATTTCCTGATCACATTCAAACATACTTTGAGTATGAAGATTCCAATAGATATGAGGAAGATGTCATGTTCAACGAACTTAGCTCCATTGTGCCATTTTACCATTGTGACGAGTTCCAGAGTTGA 1068 0.4401 MAKKSQLRTQKNNATNDNILNTTNTVTTKVKRTRRSVPRDSPPQRSSIYRGVTRHRWTGRYEAHLWDKHCWNESQKKKGRQGAYDNEEAAAHAYDLAALKYWGQDTILNFPLSNYLNELKEMEGQSREEYIGSLRRKSSGFSRGISKYRGVARHHHNGRWEARIGKVFGNKYLYLGTYATQEEAATAYDLAAIEYRGLNAVTNFDLSRYIKWLKPNNMNNNNDQISINLTPINHNCSSNFTPHPNQEQELSLLHNQDSLNSIVEEATLVPHQPRPAGATSALELLLQSSKFKEMMEMTSVANLSTQLESELPQCTFPDHIQTYFEYEDSNRYEEDVMFNELSSIVPFYHCDEFQS 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10304g00001 355 PRINTS Ethylene responsive element binding protein signature 187 207 IPR001471 GO:0003700|GO:0006355
Mupr10304g00001 355 PRINTS Ethylene responsive element binding protein signature 49 60 IPR001471 GO:0003700|GO:0006355
Mupr10304g00001 355 MobiDBLite consensus disorder prediction 1 47 - -
Mupr10304g00001 355 ProSiteProfiles AP2/ERF domain profile. 48 111 IPR001471 GO:0003700|GO:0006355
Mupr10304g00001 355 FunFam AP2-like ethylene-responsive transcription factor 146 207 - -
Mupr10304g00001 355 SUPERFAMILY DNA-binding domain 47 113 IPR016177 GO:0003677
Mupr10304g00001 355 SMART rav1_2 48 117 IPR001471 GO:0003700|GO:0006355
Mupr10304g00001 355 SMART rav1_2 147 211 IPR001471 GO:0003700|GO:0006355
Mupr10304g00001 355 CDD AP2 146 207 IPR001471 GO:0003700|GO:0006355
Mupr10304g00001 355 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 22 265 - -
Mupr10304g00001 355 Gene3D AP2/ERF domain 48 113 IPR036955 GO:0003700|GO:0006355
Mupr10304g00001 355 Gene3D AP2/ERF domain 146 207 IPR036955 GO:0003700|GO:0006355
Mupr10304g00001 355 MobiDBLite consensus disorder prediction 1 31 - -
Mupr10304g00001 355 FunFam AP2-like ethylene-responsive transcription factor 47 113 - -
Mupr10304g00001 355 Pfam AP2 domain 146 197 IPR001471 GO:0003700|GO:0006355
Mupr10304g00001 355 Pfam AP2 domain 48 103 IPR001471 GO:0003700|GO:0006355
Mupr10304g00001 355 ProSiteProfiles AP2/ERF domain profile. 147 205 IPR001471 GO:0003700|GO:0006355
Mupr10304g00001 355 SUPERFAMILY DNA-binding domain 146 207 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10304g00001 Mupr-Chr10304 3247 5353 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10304g00001 44 209 AP2-EREBP Transcription Factor Family AT5G57390 71.598 2.75e-85 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mupr10304g00001 AP2 3.5e-09 CL0081