Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10298g00001 ATGGTAAGAACCCCGTCTTGCGACAAAAGTGGAGTGAGGAAAGGTACTTGGACTCCGGAGGAAGATAGCAAGTTAATTGCTTATGTCACCAGGTATGGCTCCTGGAATTGGCGCCAACTTCCCAGGTTTGCAGGTCTTGCAAGATGTGGGAAAAGTTGTAGATTGAGATGGATGAATTATCTAAGGCCTAACATCAAAAGAGGAAACTTCACTCCACAAGAAGAAGAATGCATCACCAGAATGCATAAAAAACTGGGTAACAGATGGTCTGCCATTGCGGCTGAGTTACCAGGAAGAACAGATAACGAAATAAAAAACCATTGGCACACCACACTCAAGAAG 342 0.4415 MVRTPSCDKSGVRKGTWTPEEDSKLIAYVTRYGSWNWRQLPRFAGLARCGKSCRLRWMNYLRPNIKRGNFTPQEEECITRMHKKLGNRWSAIAAELPGRTDNEIKNHWHTTLKK 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10298g00001 114 CDD SANT 69 112 IPR001005 -
Mupr10298g00001 114 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mupr10298g00001 114 CDD SANT 16 61 IPR001005 -
Mupr10298g00001 114 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 114 - -
Mupr10298g00001 114 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 114 IPR017930 -
Mupr10298g00001 114 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mupr10298g00001 114 FunFam Transcription factor RAX3 7 67 - -
Mupr10298g00001 114 Gene3D - 69 114 - -
Mupr10298g00001 114 SMART sant 13 63 IPR001005 -
Mupr10298g00001 114 SMART sant 66 114 IPR001005 -
Mupr10298g00001 114 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mupr10298g00001 114 Gene3D - 6 66 - -
Mupr10298g00001 114 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mupr10298g00001 114 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Mupr10298g00001 114 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10298g00001 Mupr-Chr10298 28 588 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10298g00001 1 114 MYB Transcription Factor Family AT2G31180 71.930 6.77e-59 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr10298g00001 Myb_DNA-binding 4.5e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10298g00001 K09422 - gmx:778184 239.965