Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10297g00004 ATGGTGGTTGCCAGCGCTGGTGCAGAAGTTGTCTGTCGGCTTGGGTCACATCCTGGTGGTTTGCTTTTTACAAAATTTGGTAGCAATCAGACTGCCCTTCTTGACTTGGCTTTCCCAGATAGTTTTGGACGATTGCATGACAGGGGGAAGGAAGTCCCAAAACCAAATAGAACTTTGACTAAGCTTTTCCCAAATAAAATTACAATTCACATGCCACAGGATGAGGCTCTTCTAGCATCTTGGAAGCAGCAATTGGATCGAGATGTTGAGACCCTCAAAATCAAAGGAAATTTGCATCAGTTGCGCACAGTTTTGGGACGTTGTGGAATGGAATGTGAAGGACATGAAACCTTATGCATTAAGGATCAGACACTTACAACTGAAAGTGCAGAGAAGATAATTGGTTGGGCTTTAAGCCACCATCTCATGCAGAATTCAGAAGCTAAGCCTGATTCAAAGCTTATATTGTCGTGTGAGAGCATTCAGTATGGAATTGGGATCTTGCAGTCTATCCAGAATGAGTCCAAGAGCTTGAAGAAATCTCTTAAGGATGTTGTAACAGAAAATGAATTTGAAAAGAGGCTTTTGGCTGATGTTATTCCACCTAGTGATATTGATGTTACTTTTGATGATATTGGAGCTCTTGAAAAGGTCAAGGATACATTGAAGGAGTTGGTGATGCTTCCTTTACAGAGGCCTGAGCTGTTTTGCAAGGGGCAATTAACCAAGCCTTGCAAAGGTATCCTATTATTTGGTCCCCCTGGAACAGGTAAAACAATGCTCGCAAAGGCAATTGCTACCGAAGCTGGTGCAAACTTCATAAACATTTCTATGTCAAGTATTACATCTAAGTGGTTTGGCGAGGGTGAGAAATACGTGAAAGCTGTTTTCTCTCTGGCTAGTAAAATTTCTCCTAGTGTTATATTTGTTGATGAGGTTGACAGCATGTTGGGTCGAAGGGAAAACCCAGGGGAGCATGAGGCCATGCGAAAGATGAAAAATGAATTCATGGTGAATTGGGATGGTTTACGAACAAAGGATACTGAGCGAGTTCTTGTGCTGGCTGCCACTAACAGGCCTTTTGACCTAGATGAGGCTGTCATAAGGAGGATGCCAAGAAGATTGATGGTAAATTTGCCAGATGCTCCTAATAGAGCAAAAATATTGAAAGTTATACTGGCAAAAGAGGAATTGTCTCCTGATGTCGATTTGGATGCAGTTGCAAATATGACCGATGGATATTCTGGAAGTGATCTTAAGAATTTGTGTGTAACTGCAGCACACCGGCCTATTAAAGAGATATTAGAAAAGGAAAAAAAGGAACGTGTTGCTGCTCTAGCAGAAGGTCAACCAGCTCCAGCATTATGCAGCAGTGGGGACGTCAGATCTTTAAACATGGAAGACTTTAAATATGCTCATCAACAGGTATGTGCAAGTGTTTCTTCTGAATCAGTAAATATGACTGAGCTTTTACAATGGAATGAACTGTATGGAGAAGGGGGTTCAAGAATAAAGAAAGCACTCAGCTATTTCATTGATAAAAGGCCTACTAGATGA 1557 0.4149 MVVASAGAEVVCRLGSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEVPKPNRTLTKLFPNKITIHMPQDEALLASWKQQLDRDVETLKIKGNLHQLRTVLGRCGMECEGHETLCIKDQTLTTESAEKIIGWALSHHLMQNSEAKPDSKLILSCESIQYGIGILQSIQNESKSLKKSLKDVVTENEFEKRLLADVIPPSDIDVTFDDIGALEKVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAIATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKISPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERVLVLAATNRPFDLDEAVIRRMPRRLMVNLPDAPNRAKILKVILAKEELSPDVDLDAVANMTDGYSGSDLKNLCVTAAHRPIKEILEKEKKERVAALAEGQPAPALCSSGDVRSLNMEDFKYAHQQVCASVSSESVNMTELLQWNELYGEGGSRIKKALSYFIDKRPTR 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10297g00004 518 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 54 511 - -
Mupr10297g00004 518 Coils Coil 168 188 - -
Mupr10297g00004 518 Gene3D - 380 474 - -
Mupr10297g00004 518 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 206 382 - -
Mupr10297g00004 518 SMART AAA_5 244 381 IPR003593 GO:0016887
Mupr10297g00004 518 ProSitePatterns AAA-protein family signature. 351 370 IPR003960 GO:0005524|GO:0016887
Mupr10297g00004 518 Pfam AAA+ lid domain 401 436 IPR041569 -
Mupr10297g00004 518 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 206 488 IPR027417 -
Mupr10297g00004 518 Gene3D - 206 487 IPR027417 -
Mupr10297g00004 518 Pfam ATPase family associated with various cellular activities (AAA) 248 377 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10297g00004 Mupr-Chr10297 24414 29840 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10297g00004 207 455 Calmodulin-binding Proteins AT3G56690 39.062 3.33e-42 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10297g00004 - - gmx:100790427 946.036