Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10297g00002 ATGGATATGGTAATTGAGGTTCTCTCCGGTGCGCACTTCTCCGGTTGGCATCCTTCTACGACGTCGTCTTCTTCTCCAACATCCTCACATTATCCCTTCATCATTGGTGTCTCTGGAGGCACGGCATCGGGGAAAACCACAGTGTGTGACTTGATCATTCAGCAACTGCAAGATCATAGAGTCGTGCTCGTCTGTCAGGATTCATTCTACCGCGGTTTGACAAATGATGAGTTGAAACGCGTTCATGAGTATAATTTTGATCATCCTGATGCATTTGACACAGAGCAACTTGTAGAAACCATCAGCCAGCTCAAATCTGGACAGTCGGTCCAGGTTCCCATATATGATTTTAAGCTTCATCAGAGATCTTCTGACAGATCCCGACAGGTCAATGCATCTGAAGTGATCATTCTGGAGGGTATATTGGTTTTTCATGAACAACGTGTCCGCAACATGATGAATATGAAGATATTTGTTGATGCAGATCCAGATGTAAGGCTTGCCCGCAGAATAAGGCGTGATACTGTTGAGAGAGGTAGAGATTATGCAAAATTTGTTAAGCCTGCCTTCGATGATTTTATTCTTCCATCCAAAAAATATGCTGACATCATCATACCTCGCGGGGGAGAGAATCGCGTAGCTATTGACTTGATTGTTCAACATATCCGCACTAAGCTTGGCCAACATAACCTCTGCAAGATATATCCCAATTTGAATATTATACAGTCTACTTTCCAGATCAGAGGCATGCACACTCTTATTCGTGACAGGGACATATCAAAGCATGATTTTATTTTTTATTCAGATCGGCTAATTCGTTTGGTAGTGGAACACGGTCTTGGTTACTTGCCGTTCACAGAGAAGCAAGTTATCACACCTACAGGCTCAATTTATACTGGAGTTGATTTTTGTAAGAAATTGTGCGGAGTATCCATTATTCGTAGTGGTGAAAGCATGGAAAATGCTTTGCGTGCTTGCTGTAAAGGAGTAAAGATCGGAAAAATTCTTCTCATTCACCGTGATGAAACCCAGCTTGTTTATGAGAAGCTTCCTAAAGATATTTCGGAAAGACATGTTCTTCTCATGGACCCAGTACTTGGTACAGGTAATACGGCGAGCCAAGCAATCGAGCTTCTTATAAAGAAGGGAGTTCCAGAGTCCCGGATAATATTCCTTAATCTCATTTCTGCTCCTGAGGGAATACATTTTGTATGTAAACGTTTTCCGCATCTGAAAATTGTCACATCGGAGATTGAAGAAGGATTAAATGACCAGTTCTGTGTCATACCAGGGTTAGGAGAATTTGGTGACCGCTACTTTGGAACGGATGATTCTTTAGTTTGA 1344 0.4204 MDMVIEVLSGAHFSGWHPSTTSSSSPTSSHYPFIIGVSGGTASGKTTVCDLIIQQLQDHRVVLVCQDSFYRGLTNDELKRVHEYNFDHPDAFDTEQLVETISQLKSGQSVQVPIYDFKLHQRSSDRSRQVNASEVIILEGILVFHEQRVRNMMNMKIFVDADPDVRLARRIRRDTVERGRDYAKFVKPAFDDFILPSKKYADIIIPRGGENRVAIDLIVQHIRTKLGQHNLCKIYPNLNIIQSTFQIRGMHTLIRDRDISKHDFIFYSDRLIRLVVEHGLGYLPFTEKQVITPTGSIYTGVDFCKKLCGVSIIRSGESMENALRACCKGVKIGKILLIHRDETQLVYEKLPKDISERHVLLMDPVLGTGNTASQAIELLIKKGVPESRIIFLNLISAPEGIHFVCKRFPHLKIVTSEIEEGLNDQFCVIPGLGEFGDRYFGTDDSLV 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10297g00002 447 Pfam Phosphoribulokinase / Uridine kinase family 34 213 IPR006083 GO:0005524|GO:0016301
Mupr10297g00002 447 FunFam Uridine kinase 29 228 - -
Mupr10297g00002 447 Gene3D - 29 228 IPR027417 -
Mupr10297g00002 447 PANTHER URIDINE KINASE 24 353 - -
Mupr10297g00002 447 NCBIfam uridine kinase 33 225 IPR000764 -
Mupr10297g00002 447 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 218 IPR027417 -
Mupr10297g00002 447 SUPERFAMILY PRTase-like 228 443 IPR029057 -
Mupr10297g00002 447 CDD UMPK 34 225 IPR000764 -
Mupr10297g00002 447 Gene3D - 229 442 IPR029057 -
Mupr10297g00002 447 PRINTS Uridine kinase signature 178 189 - -
Mupr10297g00002 447 PRINTS Uridine kinase signature 164 174 - -
Mupr10297g00002 447 PRINTS Uridine kinase signature 62 73 - -
Mupr10297g00002 447 PRINTS Uridine kinase signature 107 122 - -
Mupr10297g00002 447 PRINTS Uridine kinase signature 32 49 - -
Mupr10297g00002 447 CDD PRTases_typeI 302 415 IPR000836 -
Mupr10297g00002 447 Pfam Uracil phosphoribosyltransferase 243 442 - -
Mupr10297g00002 447 FunFam Uridine kinase 229 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10297g00002 Mupr-Chr10297 6338 11736 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10297g00002 1 444 PRT Gene Family AT5G40870 75.681 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10297g00002 K00876 - gmx:100816209 827.394