Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10288g00001 ATGGATGAAAAAGGAAGAAGATGCAGCAACGGCCTTAGCAGCGAGGACGAAATGGACCTCCGAAGAGGCCCTTGGACCGTCGATGAGGACCTCACTCTTATCAATTACATTGCCACTCATGGCGAAGGTCGCTGGAACACCCTCGCCCTCTCTGCCGGGCTGAAACGAACGGGGAAGAGTTGCAGATTGAGGTGGCTCAACTATCTCCGTCCTGATGTTCGACGTGGAAACATCACGCTTCAAGAACAACTCTTGATTCTCGAGCTTCATTCTCGCTGGGGAAACCGATGGTCGAAAATTGCTCAATATTTACCTGGAAGAACCGACAATGAGATAAAGAATTATTGGAGAACCCGTGTCCAAAAGCATGCCAAACAACTGAAATGTGACGTGAATAGCAAGCAATTCAAGGATACCATGCGTTACCTTTGGATGCCGAGGTTGGTGGAACGCATTCAAGCAGCCGCGGCGGCCTCAGACACCACAACCGTCGTCGCCGCCGCCGCCTCTCCCGTCACAAACAATAATGCATACACCTACGGCAACAACCTCAATAACAACAACAATTTTGAGGTTCATAATGATAGCGGCAAAATGGGGTTAACTCCTTCGGTTATGAAGAATGAGTTTGTGGGTTCACAAAGTTACACCCCGGAGAATAGTAGCACGGTGGCGTCATCATCAGACTCGTTTGGGACTGATTATTACAGTGTCCCGGTTAGTAGTAACAATACCACTAATCCTGCGAACTATTATCAACCCTCTCAAATTAGTTACTTGGATTGCATCACTAGCCCGTCTGGGTTGTTCCCTCAGGGACTGGATTTCCAATCCATGGAACCAAACAACCCCTGGAATATGCAAAACGGGGACTCGTCCGACAATTTTTGGAACGTTGAAACCATGTTGTTCTTAGAGCAGCAACTCATGAATGACAACATGTGA 945 0.4794 MDEKGRRCSNGLSSEDEMDLRRGPWTVDEDLTLINYIATHGEGRWNTLALSAGLKRTGKSCRLRWLNYLRPDVRRGNITLQEQLLILELHSRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAAASDTTTVVAAAASPVTNNNAYTYGNNLNNNNNFEVHNDSGKMGLTPSVMKNEFVGSQSYTPENSSTVASSSDSFGTDYYSVPVSSNNTTNPANYYQPSQISYLDCITSPSGLFPQGLDFQSMEPNNPWNMQNGDSSDNFWNVETMLFLEQQLMNDNM 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10288g00001 314 CDD SANT 24 69 IPR001005 -
Mupr10288g00001 314 Gene3D - 78 142 - -
Mupr10288g00001 314 ProSiteProfiles Myb-like domain profile. 17 69 IPR001005 -
Mupr10288g00001 314 SUPERFAMILY Homeodomain-like 19 116 IPR009057 -
Mupr10288g00001 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 124 IPR017930 -
Mupr10288g00001 314 FunFam MYB transcription factor 79 142 - -
Mupr10288g00001 314 SMART sant 74 122 IPR001005 -
Mupr10288g00001 314 SMART sant 21 71 IPR001005 -
Mupr10288g00001 314 CDD SANT 95 118 IPR001005 -
Mupr10288g00001 314 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 17 207 IPR044676 GO:0003700|GO:0006355|GO:0043565
Mupr10288g00001 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 73 IPR017930 -
Mupr10288g00001 314 Pfam Myb-like DNA-binding domain 22 69 IPR001005 -
Mupr10288g00001 314 Pfam Myb-like DNA-binding domain 75 118 IPR001005 -
Mupr10288g00001 314 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
Mupr10288g00001 314 FunFam Myb transcription factor 22 74 - -
Mupr10288g00001 314 Gene3D - 19 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10288g00001 Mupr-Chr10288 1292 2886 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10288g00001 1 305 MYB Transcription Factor Family AT3G06490 55.385 4.14e-89 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr10288g00001 Myb_DNA-binding 1.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10288g00001 K09422 - gmx:100791349 492.271