Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1027g00003 ATGGCCAATGAAGGAGACAAAAGCAATGACTTCTACACGATCCTTGGTTTGGACAAGGAGTGCACTGAATCGGACCTAAAGAAAGCTTATAAGAAACTTGCAAAGAAATGGCACCCGGATCGTTGTTCTGCGTCGGGGAATTCAGAGTTAGTGGAAGAGGCTAAGAAGAAATTTCAGGAAATTCGGGAAGCATATTCTGTTTTATCTGACGCCAACAAAAGGTTAATGTACGACGTAGGAGTCTACGACAGTGATGACGACGAAAACGGCATGGGGGACTTCTTGGATGAAATGTTAACAATGATGAGTCAGACTAAATCAAATGAAAGTGGAGAGGAGAGCTTTGAGGAGTTGCAACAGTTGTTTGAAGACATGTTTCAAGCAGATATTGGATTGGATGGAAGCCCTTCTCTTGCTTCTGCTGATTGCTCTACTTCATCGGCATACATGACTTATAGTGAAAGTTCTAGTTCAAATAAACGCAATTCCAATGAGATGAATTTTGGGAAGGCAGAGGATTCTTCTGGCTTTCATACCAGTTACCAAAATTTCTGTTTAGGGGTGGAGCAACTCCAAGATATAAAGAAGGGAAAGGAGGGAATTCCAGAAGGAGGAGGTAGCAATAGACAGAGAAATGGAAGAAAGCAAAAAATGTCCTATGGCCATGATGTTTCATCTAATAACTACCCTGGAATTTCCACAAAGTAA 708 0.4138 MANEGDKSNDFYTILGLDKECTESDLKKAYKKLAKKWHPDRCSASGNSELVEEAKKKFQEIREAYSVLSDANKRLMYDVGVYDSDDDENGMGDFLDEMLTMMSQTKSNESGEESFEELQQLFEDMFQADIGLDGSPSLASADCSTSSAYMTYSESSSSNKRNSNEMNFGKAEDSSGFHTSYQNFCLGVEQLQDIKKGKEGIPEGGGSNRQRNGRKQKMSYGHDVSSNNYPGISTK 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1027g00003 235 Gene3D DnaJ domain 7 134 IPR036869 -
Mupr1027g00003 235 SMART dnaj_3 9 73 IPR001623 -
Mupr1027g00003 235 PANTHER PUTATIVE, EXPRESSED-RELATED 2 180 - -
Mupr1027g00003 235 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Mupr1027g00003 235 MobiDBLite consensus disorder prediction 209 235 - -
Mupr1027g00003 235 SUPERFAMILY Chaperone J-domain 8 93 IPR036869 -
Mupr1027g00003 235 PRINTS DnaJ domain signature 30 45 IPR001623 -
Mupr1027g00003 235 PRINTS DnaJ domain signature 73 92 IPR001623 -
Mupr1027g00003 235 PRINTS DnaJ domain signature 53 73 IPR001623 -
Mupr1027g00003 235 PRINTS DnaJ domain signature 12 30 IPR001623 -
Mupr1027g00003 235 CDD DnaJ 10 70 IPR001623 -
Mupr1027g00003 235 Coils Coil 51 71 - -
Mupr1027g00003 235 MobiDBLite consensus disorder prediction 152 173 - -
Mupr1027g00003 235 ProSiteProfiles dnaJ domain profile. 10 81 IPR001623 -
Mupr1027g00003 235 MobiDBLite consensus disorder prediction 196 235 - -
Mupr1027g00003 235 Pfam DnaJ domain 10 78 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1027g00003 Mupr-Chr1027 11100 14241 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1027g00003 12 78 C2H2 Transcription Factor Family AT1G74250 42.647 1.25e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1027g00003 - - gmx:100791192 373.244