Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1026g00004 ATGCCTCCGCCGCAGCCCCGCCGCGTGGACCCCAAAATCTGGCGCGCATGTGCCGGCGCCGCCGTGCACATCCCGAAGCTGCATTCTAGGGTTTACTACTTCCCCCAGGGCCACATGGAGCACGCGTCTCCCTCACACACTCACTCTCTCTCTCCTCTCCTTCGTTCCCTCCCCTTCGTTCCCTGCCACGTGTCCTCCCTCGATTTGCTCGCCGATCCTCTCTCCGACGAGGTCTTTGCCAAAATCCTCCTCACTCCCCTCCCCCGCCAGCACCCTTTCCACCACGACCAAAACGACAACCGCAACCAAAACGACAGCGACGAACAAACCGACGTCGTTTCGTTCTCCAAAATCCTCACCCCCTCCGACGCCAACAACGGCGGCGGCTTCTCCGTCCCGCGCTTCTGCGCCGACTCTGTCTTCCCTCCCCTCGATTTCCGCGCCGATCCTCCCGTGCAGCTCCTCTCCATCACCGACGTCCACGGTGTCGCGTGGCGTTTCCGCCACATCTACCGCGGGACGCCGCGCCGGCACCTCTTCACCACCGGCTGGAGCAAGTTCGTCAACCACAAGAAGCTTATCGCCGGCGACTCTGTCGTGTTCGTCAGGGACTCCGAGGGGAAGGTCTCCGTCGGGATCCGCCGCGCGGCGCGGTTCGTGACGAACAGCGAGGCCGGCGAGGTGGAGGCGGAATCGCGGTTCGCGACGGGGAGAGTGTCGGTGAAGGCAGTGGCTGCGGCGGCGGAGTCGGCGGCGCGAAACGCGCCGTTTGAGGTCGTGTACTATCCGAGGGCGGGTTTTGCGGATTTTGTGGTGAGTGCTGAGGTCGTGGATGAAGCGATGAAGTGCGCGTGGGTTGGTGGAATGAGAGTGAAGATAGGAATGGAGACTGAAGATTCTTCCAGAATGACGTGGTTTCAGGGCACGGTGTCTTCTGCACATGGCCATGATAATGGACCTTGGCGCATGCTTCAGGTTAACTGGGATGAACCTGAAGTCTTGCAGAATGCAAAGCGAGTCAGTCCTTGGCAGGTTGAACTTGTTTCCCCCACACTTGCACTTCATACAGTATTTCCCCCTACGAAAAGGTTTAGAGCTGAACAGGGTTCTGGGCTGTTAAGTGATAGAGATGGAGACCCCTTCTTTCCTATGACTGGGTTCCCTAACTCATCAATGGGACACTTGAATAAAAAACTGTTGAGTTATGATAATTTTCCTGCTGGCATGCAGGGAGCCAGGCATGATCTATTTTCTGCATCGAGTTTTTCCAACTTTTTAAATGATAACTCTTATCTGTATATGGGTAGTAGTTCCTTTGGGAACAATACAGTGCGAAGTTTGGGAACTGTGTCAACAGAGCTAAACATTGGCAGTTCTCAATCAGATGACTTGTCACCACATAGTCAGAGTAGTTTTCATTCCTTTGGCACAGAGGTTACAGGAACCCACAACTGCAACACCAAAGTTGGTTCTGGTTCAATTCTGTTATTTGGTAAGGTCATACAGCCTGTTGAAAGTGATTTGCATGATGCTGATTGCATAGGAGGTGATGGCAGTGGAGGCTGCAAAGAAACTGAAGGCATTGACAACCTTCTAGATCATTCTTTGACTTACTCAAAACTGCTCAACAAACTTGATGTCCAATGTCAACCTGTCTCACCAGACACCAGTTGA 1674 0.5418 MPPPQPRRVDPKIWRACAGAAVHIPKLHSRVYYFPQGHMEHASPSHTHSLSPLLRSLPFVPCHVSSLDLLADPLSDEVFAKILLTPLPRQHPFHHDQNDNRNQNDSDEQTDVVSFSKILTPSDANNGGGFSVPRFCADSVFPPLDFRADPPVQLLSITDVHGVAWRFRHIYRGTPRRHLFTTGWSKFVNHKKLIAGDSVVFVRDSEGKVSVGIRRAARFVTNSEAGEVEAESRFATGRVSVKAVAAAAESAARNAPFEVVYYPRAGFADFVVSAEVVDEAMKCAWVGGMRVKIGMETEDSSRMTWFQGTVSSAHGHDNGPWRMLQVNWDEPEVLQNAKRVSPWQVELVSPTLALHTVFPPTKRFRAEQGSGLLSDRDGDPFFPMTGFPNSSMGHLNKKLLSYDNFPAGMQGARHDLFSASSFSNFLNDNSYLYMGSSSFGNNTVRSLGTVSTELNIGSSQSDDLSPHSQSSFHSFGTEVTGTHNCNTKVGSGSILLFGKVIQPVESDLHDADCIGGDGSGGCKETEGIDNLLDHSLTYSKLLNKLDVQCQPVSPDTS 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1026g00004 557 Gene3D - 286 352 - -
Mupr1026g00004 557 Pfam B3 DNA binding domain 115 216 IPR003340 GO:0003677
Mupr1026g00004 557 SMART B3_2 115 217 IPR003340 GO:0003677
Mupr1026g00004 557 Gene3D - 112 217 IPR015300 -
Mupr1026g00004 557 CDD B3_DNA 114 215 IPR003340 GO:0003677
Mupr1026g00004 557 FunFam Auxin response factor 113 217 - -
Mupr1026g00004 557 SUPERFAMILY DNA-binding pseudobarrel domain 108 231 IPR015300 -
Mupr1026g00004 557 Pfam Auxin response factor 247 322 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mupr1026g00004 557 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 8 482 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mupr1026g00004 557 MobiDBLite consensus disorder prediction 90 110 - -
Mupr1026g00004 557 ProSiteProfiles B3 DNA-binding domain profile. 115 217 IPR003340 GO:0003677
Mupr1026g00004 557 MobiDBLite consensus disorder prediction 92 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1026g00004 Mupr-Chr1026 35134 38283 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1026g00004 7 539 B3 DNA Binding Superfamily AT1G77850 47.636 8.35e-165 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mupr1026g00004 B3 2e-20 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1026g00004 - - ccaj:109814808 840.491