Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10263g00005 ATGGCGAACGAATTATTAGTTAGTGCCTCACATGGTTCTGAGTTACTTTCCCGGACCATCTTTACTGTATTTGACACTGTCAAAGCGGCCAATGAGGTTGTCATTCACAAGGAAAATTTTAGGAGATTTTCTATTCACTTGGAGAATATCTCATTTATATTGAAGTCTTTATCAAAGGAAGAAATACACAATCCCCAGAGCTTGGAAAATGCTATGAATGGTCTCAACCGAGAGGTAGGAGTTGCTAAGCAGCTGGTTGTTGAGTGCAACAGTAGAAGTAAGGTTTATCTTTTAATGAATTCCAGAAAGGTCGTTACACGCTTGAACTGTTGTGCCAAGGATATAGGTCACGCCATAAGCCTCATCCCTTTGGCCACTTTGGAGATTAACCCTGGTGTGAATCAACAGATAAGTGAGTTGAGTCAGAAAATGTTAGATGCTGAGTATCAAATAGGTGCAGCATATGAGGAAATTTTGGAAAAAATTGAGACAGCAATACAAGAGGGCAATGTTGATCTGTCGTATGCGAATCAGTTGCTAACCGGCATTGCAGATGCCATTGGGGTCCCTATGGAGCATGGTGCTTTGAAGAGAGAATTTGAAGAGCTGAAAAATGAAATGGAAAATGCCAAGTCAAGGATAGATGTGGCAGAAGCTCTACATATGGAGCAGGTTGTTGCAGTGCTTGGAAGGGCTAATTTTATAACTTCAGCACAAGAGAGGGAAACTAAGTATTTTGAGAAGAGAAATTCCTTGGGAGAGAGACCATTGATGGCTCTTCGCTCCTTTTACTGTCCAATCTCTCTTGATATTATGGTGGACCCTGTTGAGACTTCTTCTGGGACAACATTTGAGAGAAGTGAAATTGAGAAGTGGTTTGCTGAAGGGAATACTCACTGTCCCTTGACTCGGTTACCTCTGGATACTAAAATCCTGAGGCCAAATAAAACTCTTAAACAGTCTATTCGAGAATGGAAGGATAGGAACACAATGATTACAATTTCTGCCATCAAATCTGAGCTTGAAACCAATGAAGAAGAGGGAGTGATTCAATCCTTAGACAAATTACAAGACCTGTGCCTAGAAAGAGAGGTACACCGAGAATGGTTAAAAATGGAGAATTACATTACTGTTCTCGTTGGACTTCTCAGTTCCAAAAATCGTGAAATAAGGAGTCGTGTTCTACTCATCCTGTCTATGCTTGCAATGGATAATGCAGAGAACAAGGAAGATGTTGCTAAAGTGGATAATGCACTTGGAACAATTGTCCGCTCACTTTCACGTCAAGTTGAGGAACGCAAGTTGGCATTGGAGTTGCTATTGAAGTTATCTACAAGTAAAATGGTGTGCAGTCTCATAGGAAATATTCAAGGAAGCATACTTCTCCTGGTATCAATGTTAAATAGCGATGATGTTGAAGCGGCCAAAAATGCACATGAGCTGCTGGAAAACCTCTCTTTTGTTGATCAGAATGTCATAGAGATGGCAAAGGCAAATTATCTCAAGCCTTTACTGCTGAAACTTTCTACAGGACCAGAAAATATGAAAATAGTCATGACCGAAACTTTGTCGGAAATTACATTGACCGACCAGAATAAATTGTCCTTGGTCAAAGATGGGGCATTGCGACCTCTTCTTCAGCTGCTCTTAAATAATGATGTGGAAATCATGAAAGTGGCTGTCAAAGCTCTACTACAGCTCTCAAGTTTGCCGGAGAATGGCCTGCAGATGATTAAGGAAGGTGTTGCTCAACCACTGTTGGAACTGCTATACTGTCACAGTTTACAGTCACCTACTCTGCTTGAACAGGTTGTTGCCACAATAATGCATCTTGCCATATCAACATCTCACCCTCAAGCTGAAGCTGAACATGTTTCATTGTTAGATTCTGAGGATGACATATTCAAATTCTTCTCTCTAATTTCTTTGACTGAACCTGAGATACAAAACAAAATTCTCAAAGCTTTCCAGGCATTGTGCCAATCTTTCTATGGCTTCCGCATCAGAAAGAGGTTGAGACAGATCTCAGCTGCTAAAGTATTGGTCCACTTGTTGGAGCTTAATACCCAAACAGTGCGGGTCAATGCCTTGAAGCTTTTCTATTGCTTGACAGAAGACGGTGATTATGGCAACATCTCATCACATATAACTGAAAGATTCATCGAAGTCTTGCTTACCATCATCGAGGCTTCTGATGACGTAGAAGAGATGGTTACTGCTATTGGTATCATCTCTAAACTACCACAGGAGTCTCACGTGACCCAGTGGCTTCTGGATTCCGGGGTACTTAAAACTATTTTGACTTGCCTTACCGATCAACACAAGCATGCCTCACACAAAAAGCAAGTCATAGAGAATTCTGTTCAAGCTCTTTGTCGTTTTACTGTCTCAACAAATCTGGAGTGGCAGAAGAGAGTGGCGTTAGAAGGCATAATCCCAGTGCTGGTGCAATCGCTGCTTTCTGGAACGCCCTTTACTAAACAAAATGCCGCCATTTCAATCAAGCAGTTTTCAGAAAGTTCATATTGCTTGAGCGAGCCCATAAAGAAGCCGGGTATTTTCAAATGCTGCCTTGTAGCCCAAGAAACTGGTTGCCCAGCACACCTCGGCACCTGCTCAGTTGAGTCTTCATTTTGCATTTTGCAAGCTAATGCCTTGGAGCCCCTTGTGCGCATGCTTGCAGAGAAAGATGTTGGAACGCGTGAAGCTTCCTTAGATGCACTACTAACTTTGGTTGATGGTGAAGCACCACAGAGTGGAAGTAAGGTACTTGCAAATTCAAATGCTATTACACCAATGATAAAACTATTGAGTGTTCAGGTTCCCAGGTTGCAGGAAAAAATGCTAATAGCTTTAGAACGAATTTTTCAACTAGATGAAGTGAGAAATAAGTACAAATCTGTAGCCACAATGCCCTTGGTAGAGATAACTCAGGGGAAAGATAGCCGTTTGAAAAGTCTTGCTGCCAGATGCCTTGCTCAATTGGATGTACTTGAGAAACAATTCACTCCAAAGCTGAACGCTGCAGAAGATGTTCAAAAAATTTACATGTCAGTTTTTTCTCTCTCCAGATTTTCAGGTGAAGATGTGTCTGCACAGAACCAAGTGAAGGCGTCTGTTCAACGAAAAATACGGCAAAGTATTGCAGAAGAGTATCCGGGCCTTGAACCTGTGTTGGATGATATACTTCCCAAGAAGTCCCCTCTTATAAACCATCTCAATCTGGTTCTTGTGAACAACGTGCCTTTGTTTTTCAGTGTCCGTGATGGACCATACATGCCCACCTTGCGACTTCTCCATCAATATCCAAATATAATGAAGAAGTTACAAGTTGACCGTGGGGCAATAAGATTTGTCTTGGCTGGTGCGAACATAATGTGTCCTGGTCTCACATCTCCTGGGGGTGTTTTGGATGAGGATGTAGGGGCAGAATGTCCTGTGGCCATCATGGCTGAAGGGAAACAGCATGCTCTTGCTATCGGCTTTACAAAAATGTCAGCAAAAGACATAAAAGCAATCAATAAGGGAATTGGGGTTGACAACTTGCATTATCTCAATGATGGTCTTTGGAAGATGGAGCGACTTGATTGA 3591 0.4188 MANELLVSASHGSELLSRTIFTVFDTVKAANEVVIHKENFRRFSIHLENISFILKSLSKEEIHNPQSLENAMNGLNREVGVAKQLVVECNSRSKVYLLMNSRKVVTRLNCCAKDIGHAISLIPLATLEINPGVNQQISELSQKMLDAEYQIGAAYEEILEKIETAIQEGNVDLSYANQLLTGIADAIGVPMEHGALKREFEELKNEMENAKSRIDVAEALHMEQVVAVLGRANFITSAQERETKYFEKRNSLGERPLMALRSFYCPISLDIMVDPVETSSGTTFERSEIEKWFAEGNTHCPLTRLPLDTKILRPNKTLKQSIREWKDRNTMITISAIKSELETNEEEGVIQSLDKLQDLCLEREVHREWLKMENYITVLVGLLSSKNREIRSRVLLILSMLAMDNAENKEDVAKVDNALGTIVRSLSRQVEERKLALELLLKLSTSKMVCSLIGNIQGSILLLVSMLNSDDVEAAKNAHELLENLSFVDQNVIEMAKANYLKPLLLKLSTGPENMKIVMTETLSEITLTDQNKLSLVKDGALRPLLQLLLNNDVEIMKVAVKALLQLSSLPENGLQMIKEGVAQPLLELLYCHSLQSPTLLEQVVATIMHLAISTSHPQAEAEHVSLLDSEDDIFKFFSLISLTEPEIQNKILKAFQALCQSFYGFRIRKRLRQISAAKVLVHLLELNTQTVRVNALKLFYCLTEDGDYGNISSHITERFIEVLLTIIEASDDVEEMVTAIGIISKLPQESHVTQWLLDSGVLKTILTCLTDQHKHASHKKQVIENSVQALCRFTVSTNLEWQKRVALEGIIPVLVQSLLSGTPFTKQNAAISIKQFSESSYCLSEPIKKPGIFKCCLVAQETGCPAHLGTCSVESSFCILQANALEPLVRMLAEKDVGTREASLDALLTLVDGEAPQSGSKVLANSNAITPMIKLLSVQVPRLQEKMLIALERIFQLDEVRNKYKSVATMPLVEITQGKDSRLKSLAARCLAQLDVLEKQFTPKLNAAEDVQKIYMSVFSLSRFSGEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDILPKKSPLINHLNLVLVNNVPLFFSVRDGPYMPTLRLLHQYPNIMKKLQVDRGAIRFVLAGANIMCPGLTSPGGVLDEDVGAECPVAIMAEGKQHALAIGFTKMSAKDIKAINKGIGVDNLHYLNDGLWKMERLD 1196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10263g00005 1196 Coils Coil 193 220 - -
Mupr10263g00005 1196 ProSiteProfiles PUA domain profile. 1106 1186 - -
Mupr10263g00005 1196 Gene3D - 14 126 IPR036537 GO:0007166
Mupr10263g00005 1196 FunFam Malignant T-cell-amplified sequence 1 1021 1195 - -
Mupr10263g00005 1196 SUPERFAMILY RING/U-box 254 331 - -
Mupr10263g00005 1196 ProSiteProfiles U-box domain profile. 258 332 IPR003613 GO:0004842|GO:0016567
Mupr10263g00005 1196 CDD MCT1_N 1025 1094 - -
Mupr10263g00005 1196 SMART arm_5 917 957 IPR000225 GO:0005515
Mupr10263g00005 1196 SMART arm_5 487 528 IPR000225 GO:0005515
Mupr10263g00005 1196 SMART arm_5 750 796 IPR000225 GO:0005515
Mupr10263g00005 1196 SMART arm_5 570 613 IPR000225 GO:0005515
Mupr10263g00005 1196 SMART arm_5 873 913 IPR000225 GO:0005515
Mupr10263g00005 1196 SMART arm_5 529 569 IPR000225 GO:0005515
Mupr10263g00005 1196 Gene3D - 371 865 IPR011989 -
Mupr10263g00005 1196 NCBIfam uncharacterized domain 2 1077 1187 IPR004521 GO:0003723
Mupr10263g00005 1196 SUPERFAMILY ARM repeat 874 996 IPR016024 -
Mupr10263g00005 1196 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 240 338 IPR013083 -
Mupr10263g00005 1196 Gene3D - 866 1025 IPR011989 -
Mupr10263g00005 1196 Pfam MCAfunc domain 27 145 IPR045766 -
Mupr10263g00005 1196 Pfam PUA domain 1108 1185 IPR002478 GO:0003723
Mupr10263g00005 1196 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 540 582 IPR000225 GO:0005515
Mupr10263g00005 1196 Pfam U-box domain 263 329 IPR003613 GO:0004842|GO:0016567
Mupr10263g00005 1196 CDD PUA_MCTS-1-like 1094 1190 - -
Mupr10263g00005 1196 Gene3D - 1026 1195 - -
Mupr10263g00005 1196 CDD RING-Ubox_PUB 263 312 IPR045210 -
Mupr10263g00005 1196 Pfam Pre-PUA-like domain 1028 1103 IPR041366 -
Mupr10263g00005 1196 SMART Ubox_2 262 325 IPR003613 GO:0004842|GO:0016567
Mupr10263g00005 1196 SUPERFAMILY PUA domain-like 1106 1192 IPR015947 -
Mupr10263g00005 1196 SUPERFAMILY ARM repeat 333 616 IPR016024 -
Mupr10263g00005 1196 Pfam Armadillo/beta-catenin-like repeat 530 568 IPR000225 GO:0005515
Mupr10263g00005 1196 SMART pua_5 1107 1186 IPR002478 GO:0003723
Mupr10263g00005 1196 SUPERFAMILY ARM repeat 522 855 IPR016024 -
Mupr10263g00005 1196 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 13 1001 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10263g00005 Mupr-Chr10263 26465 37216 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10263g00005 262 996 U-box Gene Family AT1G76390 27.089 6.49e-56 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10263g00005 - - gmx:100818273 1652.88