Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10253g00004 ATGATACTGATGAGGGAATTGAAGTTCACCAGTTCTGTTGATTCTGATATTAGCAATCTGACCAACAATTCATCTCAGCAAATAAATCAGTCGCACAGTCCTTTGACTCAATTGGAATTTTGTATATTTGGGGTCATGGATAACTCAAATGATGACTCATCATCGCCCTTGAGTTTTGTATCTTCTCACCTGTCACATTTTTCTAGTAATCACCATGTGTATTCCTCCACAAGCAATGAGCATGTGGAAAATATTGAAATTTTGAGTCTGAGTAATCTCAGTGGATGCCTGGAGAAGCTATTCATTGAGACTGAGTATGACTATTGTAATGCTGAGATTCTTGTTGAAGACATCCCTGTGGGTATTCATTGCAGTATATTGGCATTGCGTAGTCCGTTCTTTCACGAGTTTTTTAAGAAAGGAACTGATGGATCAGGGAAGGAAGGAAAGCCAAGGTATCTCATGTCGGATTTGGTTCCTTATGGCACAGTTGGATATGAAGCTTTCCAAGTTTTCTTGTACTATTTGTATACTGGAAGGCTAAAGGATTCACCAACAGAAGTGACAACATGTGTTGATGAAACATGTATTCATGATGCATGTCGCCCTGCTATCGATTTTGCTTTGGAGCTGATGTATGCTTCTGCCACTTTTCAGATTGAAGAGCTGGTTTTACTTTTTCAGGCTTCTCAATCCGTGTATATAACTAGTCATCCTATATTACTTTCTCTGTTAGTTGTATGTTTCTCTCTTGTTACCGAAAAAAGACAGCTTCTGCTTTTGCTTAACAAATCTAATGTATGTATCTCTTCAATGATGCAGCGGCATCTCCTAAATTTTGTTGAGAAGGCTCTTGTGGAAGATGTCGTTCCTATTCTTTTGGCTGCCTTCAACTGCAAGCTAGACCAGCTTCTCTCTCGGTGCATTCAGCGAGTAGCGAGATCTGACTTTGACAACATATCCATGGAGAAAGAGCTCCCTCTTGAAGTTGTGACTGAAATCAAAGCACTCAGACTCCAATCTCAGCCAGAATCCACACCTAATGCAATGGAAGTGGAGCTTTTGAATGAAAAGAGAAAGAAGAGAATCCATGAGGCATTGGACTCTGATGATGTTGAGCTACTGAAGCTTCTTCTAAACGAGTCTAGTAGTGTCACTCTAGATGATGCCTTTGCCCTGCACTATGCCTGTGCCTATAGTGATTCTAAGGTTATTCAAGAAGTTCTTAATCTAGGTTTGGCTGATATTCTCCTTAGAAATTCCCGAGGATACACGGTTCTTCATGTGGCTGCAAGGCGAATGGATCCGTCCATTTTGGTAGCACTACTGAAAAAAGGGGCCTGTGCATCAGATACCACTCCAGATGGACAAACTGGTCTTGCAATTTGTCAGAGGTTGACAAGACGCAAGGATTATCACGAGAAAATGGTGCAGTGTAAGGAATCTAACAAGGACAGGCTCTGTGTTGATATCCTGGAGAGGGAGATGAGAAGAAATTTTATGACAACAGCTGATGATTTGCACATGAGGCTGGATTACCTTGAAGATAGAGTTACATTAGCTAGGCTGTTGTTTCCCGCTGAGGCTAGGGTAGCCATTGAGAATGCTGAGGCAGATTCATCATCACTGTATGCAAGCTCATCAGCTTTGAAGGGCCCAAATGGCAATCTAAAAGAAATAGATCTAAATGAATCTCCCTCTACTCGAACCAGAAAACTTCAGTTAAAATTGCATTCCCTTATAAAAACAGTTGAAAATGGTAGGCGCTTCTTTCCCCATTGCTCTGAAGTGATTGATAATTTTCTGGAAGACGATAAGCCAGATGTTTTCTTACTAGAGAAGGGCTCTGAAGAAGAGCAGAGAATCAAGAAAACACGCTTCATGGAACTTAAATATGATGTGCAGAAGGTATTTCACAAGGATATTGCAAAAGATAACCATTCGGGTTGTTCATCTTCAGTGTCTTCCTCATTATCTTCAACACGTAGGGAAGGTCTTAACCACAGAGTGAGGAGAAAATGA 2022 0.4085 MILMRELKFTSSVDSDISNLTNNSSQQINQSHSPLTQLEFCIFGVMDNSNDDSSSPLSFVSSHLSHFSSNHHVYSSTSNEHVENIEILSLSNLSGCLEKLFIETEYDYCNAEILVEDIPVGIHCSILALRSPFFHEFFKKGTDGSGKEGKPRYLMSDLVPYGTVGYEAFQVFLYYLYTGRLKDSPTEVTTCVDETCIHDACRPAIDFALELMYASATFQIEELVLLFQASQSVYITSHPILLSLLVVCFSLVTEKRQLLLLLNKSNVCISSMMQRHLLNFVEKALVEDVVPILLAAFNCKLDQLLSRCIQRVARSDFDNISMEKELPLEVVTEIKALRLQSQPESTPNAMEVELLNEKRKKRIHEALDSDDVELLKLLLNESSSVTLDDAFALHYACAYSDSKVIQEVLNLGLADILLRNSRGYTVLHVAARRMDPSILVALLKKGACASDTTPDGQTGLAICQRLTRRKDYHEKMVQCKESNKDRLCVDILEREMRRNFMTTADDLHMRLDYLEDRVTLARLLFPAEARVAIENAEADSSSLYASSSALKGPNGNLKEIDLNESPSTRTRKLQLKLHSLIKTVENGRRFFPHCSEVIDNFLEDDKPDVFLLEKGSEEEQRIKKTRFMELKYDVQKVFHKDIAKDNHSGCSSSVSSSLSSTRREGLNHRVRRK 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10253g00004 673 ProSiteProfiles Ankyrin repeat region circular profile. 422 447 - -
Mupr10253g00004 673 SUPERFAMILY POZ domain 92 226 IPR011333 -
Mupr10253g00004 673 CDD BTB_POZ_NPR_plant 93 228 - -
Mupr10253g00004 673 FunFam regulatory protein NPR3-like 355 496 - -
Mupr10253g00004 673 Pfam Ankyrin repeat 423 448 IPR002110 GO:0005515
Mupr10253g00004 673 MobiDBLite consensus disorder prediction 647 663 - -
Mupr10253g00004 673 Gene3D Potassium Channel Kv1.1; Chain A 81 232 IPR011333 -
Mupr10253g00004 673 MobiDBLite consensus disorder prediction 644 673 - -
Mupr10253g00004 673 PANTHER REGULATORY PROTEIN NPR3 67 663 IPR044292 GO:0009862|GO:2000022|GO:2000031
Mupr10253g00004 673 Pfam BTB/POZ domain 105 186 IPR000210 GO:0005515
Mupr10253g00004 673 SMART BTB_4 109 235 IPR000210 GO:0005515
Mupr10253g00004 673 SMART ANK_2a 388 418 IPR002110 GO:0005515
Mupr10253g00004 673 SMART ANK_2a 358 387 IPR002110 GO:0005515
Mupr10253g00004 673 SMART ANK_2a 422 451 IPR002110 GO:0005515
Mupr10253g00004 673 ProSiteProfiles BTB domain profile. 109 185 IPR000210 GO:0005515
Mupr10253g00004 673 Pfam NPR1/NIM1 like defence protein C terminal 464 657 IPR021094 -
Mupr10253g00004 673 Gene3D - 354 497 IPR036770 -
Mupr10253g00004 673 ProSiteProfiles Ankyrin repeat profile. 422 447 IPR002110 GO:0005515
Mupr10253g00004 673 SUPERFAMILY Ankyrin repeat 350 465 IPR036770 -
Mupr10253g00004 673 Pfam Domain of unknown function (DUF3420) 316 364 IPR024228 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10253g00004 Mupr-Chr10253 23862 28179 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mupr10253g00004 NPR1_like_C 8.5e-71 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10253g00004 K14508 - gmx:100814739 889.026