Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10253g00003 AACACAGGGAGTCTCGGTTACCGAGTATCCTCAGCAAAGCGTGCTCTATCTGTCTCTGCCCTCTTCCAAGAGTATGTTACTCAAGATTTGCCTCTGGTTGGGTTGAGTTCATCTTCCCTCTTAACTCAAACGGTGACCCTGTATTCAAACAGTCCTTTGACTCAATTGGAATTTTATATATTTGGGGTCATGGATAACTCAAATGACTCATCATCGTCCTTGAGTTTTGTATCATCACACCTGTCGCATGGTTCTAGTAATCACAACGTGTCTTCCAACACTAGCAATGAGAATGGGACAAATATTGAAATTTTGAGCCTGAGTAAGCTGAGTGGAAGCCTTGAGAAGCTATTGATTGAGGCTGACTATGATTATAGTGATGCTGAGATTCTTGTTGAAGATATCCCTGTGGGTATTCATCGCTGTATATTGGCGTCGCGTAGTCCGTTCTTTCATGAGCTTTTTAAGAAAGGAATTGATGGATCAGGGAAGGAAGGAAAGCCAAGGTATCTCATGTCGGATTTGGTGCCATATGGCACAGTTGGATATGAAGCTTTCCAAGTTTTCTTGTACTATTTGTATACTGGAAAGCTAAAGGCTTCACAAACAGAAGTGACAACGTGTGTTGATGAAACATGTATTCATGATGCATGCCGCCCTGCTATCAATTATTCTTTGGAGCTGATGTATGCTTCTGCCACTTTTCAGATGAAAGAGCTGGTTTTACTTTTTCAGCGGCATCTCCTAAATTTTGTTGAGAAGGCTCTTGTGGAAGATGTCGTTCCTATTCTTTTGGCTGCCTTCAACTGCCAGCTAGACCAGCTTCTCTCTCGGTGCATTCAGCGAGTAGCGAGATCTGACTTTGACAACATATCCATGGAGAAAGAGCTCCCTCTTGAAGTTGTGACTGAAATCAAAGCACTCCGACTCCAATCTCAGCCAGAATCCACACCTAATGCAATGGAAGTGGAGCTTTTGAATGAAAAGAGAAAGAAGAGAATCCATAAGGCATTGGATTCTGATGATGTTGAGCTACTGAAGCTTCTTCTAAATGAGTCTAGTAGTGTCACTCTAGATGATGCCTTTGCCCTGCACTATGCCTGTGCCTATAGTGATTCTAAGGTTATTCAAGAAGTTCTTAATCTAGGTTTGGCTGATATTCTCCTTAGAAATTCCCGAGGATACACGGTTCTTCATGTGGCTGCAAGGCGAAAGGATCCATCCATTTTGGTAGCACTACTGAAAAAAGGAGCCTGTGCATCAGATACCACTCCAGATGGACAAACTGCTCTTGCAATTTGTCAGAGGTTGACAAGACGCAAGGATTATCACGAGAAAACAGTGCAGTGTAAGGAATCTAACAAGGACAGGCTCTGTGTTGATGTCCTGGAGAGGGAGATGAGAAGAAATTCTATGACTGTGACTATGTCTGTTTCATCGCAGTTAACAGCTGATGATTTGCACATGAGGCTGGATTACCTTGAAGATAGAGTTACATTTGCTAGGCTGTTGTTTCCCGCTGAGGCTAGGGTAGCCATTGAGAATGCTGAGGCAGATTCATCATCACTGTACGCAAGCTCATCAGCTTTGAAGGGCCCAAATGGCAATCTAAAAGAAGTAGATCTAAATGAATCTCCCTCTACTCGAACTACAAAACTTCAGTTAAAATTGCATTCCCTTATAAAAACAGTTGAAAATGGTAGGCGCTTCTTTCCCCATTGCTCTGAAGTGATTGATAATTTTCTGGAAGACGATATGCCAGATGTTTTCTTCCTAGAAAAGGGCTCTGAAGAAGAGCAGAAAATCAAGAAAGCACGCTTCATGGAACTTAAAGATGATGTGCAGAAGGCATTTCATAAGGATATGGCTGAAAATATCCATTCGGGTTTTTCATCTTCAGTGTCTTCCTCATCATCCTCATCACGTAGGGAAGATTTGTAG 1941 0.423 NTGSLGYRVSSAKRALSVSALFQEYVTQDLPLVGLSSSSLLTQTVTLYSNSPLTQLEFYIFGVMDNSNDSSSSLSFVSSHLSHGSSNHNVSSNTSNENGTNIEILSLSKLSGSLEKLLIEADYDYSDAEILVEDIPVGIHRCILASRSPFFHELFKKGIDGSGKEGKPRYLMSDLVPYGTVGYEAFQVFLYYLYTGKLKASQTEVTTCVDETCIHDACRPAINYSLELMYASATFQMKELVLLFQRHLLNFVEKALVEDVVPILLAAFNCQLDQLLSRCIQRVARSDFDNISMEKELPLEVVTEIKALRLQSQPESTPNAMEVELLNEKRKKRIHKALDSDDVELLKLLLNESSSVTLDDAFALHYACAYSDSKVIQEVLNLGLADILLRNSRGYTVLHVAARRKDPSILVALLKKGACASDTTPDGQTALAICQRLTRRKDYHEKTVQCKESNKDRLCVDVLEREMRRNSMTVTMSVSSQLTADDLHMRLDYLEDRVTFARLLFPAEARVAIENAEADSSSLYASSSALKGPNGNLKEVDLNESPSTRTTKLQLKLHSLIKTVENGRRFFPHCSEVIDNFLEDDMPDVFFLEKGSEEEQKIKKARFMELKDDVQKAFHKDMAENIHSGFSSSVSSSSSSSRREDL 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10253g00003 646 Gene3D Potassium Channel Kv1.1; Chain A 90 284 IPR011333 -
Mupr10253g00003 646 SMART BTB_4 126 252 IPR000210 GO:0005515
Mupr10253g00003 646 SUPERFAMILY Ankyrin repeat 321 436 IPR036770 -
Mupr10253g00003 646 Pfam BTB/POZ domain 124 204 IPR000210 GO:0005515
Mupr10253g00003 646 ProSiteProfiles BTB domain profile. 126 202 IPR000210 GO:0005515
Mupr10253g00003 646 Pfam Ankyrin repeats (3 copies) 335 418 IPR002110 GO:0005515
Mupr10253g00003 646 FunFam Regulatory protein NPR3 100 284 - -
Mupr10253g00003 646 ProSiteProfiles Ankyrin repeat profile. 393 418 IPR002110 GO:0005515
Mupr10253g00003 646 PANTHER REGULATORY PROTEIN NPR3 85 641 IPR044292 GO:0009862|GO:2000022|GO:2000031
Mupr10253g00003 646 SMART ANK_2a 393 422 IPR002110 GO:0005515
Mupr10253g00003 646 SMART ANK_2a 359 389 IPR002110 GO:0005515
Mupr10253g00003 646 SMART ANK_2a 329 358 IPR002110 GO:0005515
Mupr10253g00003 646 ProSiteProfiles Ankyrin repeat region circular profile. 393 418 - -
Mupr10253g00003 646 CDD BTB_POZ_NPR_plant 115 252 - -
Mupr10253g00003 646 Gene3D - 325 468 IPR036770 -
Mupr10253g00003 646 SUPERFAMILY POZ domain 123 250 IPR011333 -
Mupr10253g00003 646 FunFam regulatory protein NPR3-like 326 467 - -
Mupr10253g00003 646 Pfam NPR1/NIM1 like defence protein C terminal 435 637 IPR021094 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10253g00003 Mupr-Chr10253 17831 22227 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mupr10253g00003 NPR1_like_C 2.8e-81 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10253g00003 K14508 - gmx:100816582 936.021