Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10252g00002 ATGGAAAACATTGTTCCCCATAGTGTTACCACTTTGTTATTTTCCTTGCTACTCTTCTGCCTCACCCTGACAAATAGAGGAGTCACTTGTCTCTCACCTGATGGACAAGCCCTTCTTTCTCTTCTGTCTGCAGCAGGTCCTGATGCAAAATCATCATCTTCTGTTCTCTCCTCATGGAATCCATCAAGCTCAACACCTTGTTCATGGGAAGGCATCACTTGCTCCCCACAAGGTAGAGTCATTTCCCTCTCTATTCCAGATACTTTTCTCAACCTCTCCTCTTTACCTCCTCAGCTATCCTCTTTATCAATGCTTCAACTTCTCAATCTCTCTTCCACCAATGTATCTGGCTCCATCCCACCCTCTTTTGGTCAACTCTCCCATCTTCAGCTTCTTGACCTCTCCTCAAACTCTCTCACTGGTTCCATACCTGCTGAACTTGGAAGGCTCTCCTCACTTCAATTCCTTTTCTTGAACTCCAACAGATTGACAGGAAGCATTCCTCAACATCTTGCCAATCTCACTTCACTTGAAGTTCTCTGCCTCCAAGACAATCTTCTCAATGGTTCAATCCCATCACAGCTTGGCTCTTTGACATCTCTGCAGCAGTTTCGGATAGGTGGCAATCCATATCTCACTGGACAAATCCCATCACAGTTAGGCCTACTCACCAACCTCACCACTTTTGGTGCAGCTGCCACTGGACTTTCTGGTGCCATTCCCTCTACATTTGGTAACTTGATTAATCTACAAACTCTAGCACTTTATGATACTGAAATTTCTGGTTCAATACCACCAGAACTTGGGTTGTGTTCTGAGCTGAGAAATCTGTACCTACACATGAACAAGCTCACCGGCTCTATCCCTCCTCAATTGAGCAAGTTGCAAAAACTCACTAGCTTGCTACTTTGGGGCAATGCCTTAACTGGTCCAATCCCAGCAGAGCTTTCAAATTGTTCATCACTTGTTATATTTGATGTCTCTTCTAATGATGTCTCTGGTCAAATACCTGGAGACTTTGGGAAGCTGGTGGTTCTGGAACAGCTTCATCTATCAGACAATTCACTCACAGGTAAGATACCATGGCAGTTGAGCAACTGCACCAGCCTTTCCACTGTTCAGCTTGACAAGAATCAGTTGTCAGGTACTATTCCATGGGAGTTAGGCAAACTGAAGGTTCTGCAGAGTTTTTTCCTGTGGGGTAATTTAGTGTCTGGAACCATACCATCCTCTTTTGGAAACTGCACTGAACTATTTGCACTTGACCTTTCAAGGAACAAGCTGACAGGTTCCATCCCAGAAGAGATTTTCAGCTTGAAGAAGCTGAGTAAGCTTTTGCTTCTGGGAAATTCATTAACAGGAAGGTTGCCACCAAGTGTTGCAAATTGCCAGTCTTTGGTGAGGCTGAGGGTTGGAGAGAACCAACTTTCAGGACAGATTCCTAAAGAGATAGGCCAATTGCAGAATCTGGTGTTCCTTGACTTGTACATGAATCATTTCTCTGGAAGCATACCGGTGGAGATTGCCAATATTACTGTTCTTGAGCTGTTAGATGTTCACAACAACTACCTCACTGGGGAAATTCCATCTGTGATTGGGGAGCTTGAAAATTTGGAGCAGCTTGATCTCAGTAGAAACAGTTTGACAGGTGAAATTCCTTGGAGCTTTGGAAACTTCAGCTATTTGAACAAGCTCATCCTCAATAATAACTTGCTGACAGGATCAATTCCAAAATCCATTAGAAATTTGCAGAAGCTAACTCTTCTGGATTTGGGTTACAATAGCCTCTCTGGTGGGATTCCCCCTGAGATTGGTCATGTTACAAGCTTAACCATCAGTTTGGACTTGAGCTCGAACGCGTTTTCAGGAGAAATCCCAGATTCAGTGTCTGCTTTGACACAGTTACAGTCACTTGATCTTTCTCAAAATATGCTTTATGGAGATATTAAGGTTCTGGGATCTCTCACTAGTCTCACTTCTCTCAATATCTCCTACAACAACTTCTCAGGTCCTATCCCAGTAACTCCATTCTTCAGAACTCTCTCTTCTAATTCATATCTTCAGAACCCCCAGCTTTGCCAGTCCATTGATGGGACTACATGTTCTTCAAGTCTGATTAGGAAAAATGGTTTGAAATCTGCAAAAACCATTGCTGTGATCACAGTCATTCTAGCCTCGGTGACTATAATTCTCATTGCATCCTGGATTCTAGTAACTCGTAATCACGGATACAAGGTTGAGAAAACATTGGGGACATTAGCTTCCTCATCAAGAGCTGATGATTTCTCTTACCCTTGGACTTTCATCCCATTTCAGAAAGTAAACTTCAACATAGATAATATCTTGGATTGCTTGAAGGATGAAAATGTGATTGGAAAGGGTTGCTCCGGTGTCGTGTACAAGGCTGAGATGCCAAATGGGGAGTTGATAGCAGTGAAGAAGCTTTGGAAGGCAAGCAAAGCAGATGAAACAGTGGATTCTTTTGCTGCAGAGATTCAGATTCTCGGGTACATTCGGCACAGGAACATTGTGAGGCTCCTAGGTTATTGTTCTAACAGGAGTGTTAATCTTCTTCTCTATAAGTACATCTCAAATGGTAATCTACGACAGCTTTTACAAGGGAACAGGAACTTAGACTGGGAGACAAGATACAAGATTGCTGTTGGGTCGGCTCAAGGTCTAGCTTACCTTCATCATGATTGTGTCCCTGCAATTCTCCATAGAGATGTCAAGTGCAATAACATACTCCTCGACTCCAAATTTGAGGCATATCTGGCAGATTTTGGTCTTGCAAAGATGATGCATTCCCAAAATTATCATCATGCAATGTCCAGAGTTGCTGGTTCCTATGCATGTTTTATCACCAATGCAGAATATGGCTACTCCATGAACATAACAGAGAAGAGTGATGTGTATAGTTATGGGGTGGTTTTGCTAGAAATACTAAGTGGGCGCAGTGCTGTTGAATCCCATGTTGGAGATGGGCAACACATAGTGGAGTGGGTGAAGAGGAAGATGGGAAGCTTTGAACCAGCTGTATCAATACTAGACACAAAGCTGCAAGGTCTACCAGATCAAATGGTGCAAGAGATGCTTCAAACGCTTGGCATTGCTATGTTTTGTGTGAACTCTTCCCCAGCAGAGCGCCCCACAATGAAGGAAGTGGTTGCACTACTAATGGAGGTGAAGAACCAGCCTGAGGAAATGGGAAAGACCTCTCAGCCTCTAATAAAACAGTCCTCAAATCAAAGCTGA 3255 0.4332 MENIVPHSVTTLLFSLLLFCLTLTNRGVTCLSPDGQALLSLLSAAGPDAKSSSSVLSSWNPSSSTPCSWEGITCSPQGRVISLSIPDTFLNLSSLPPQLSSLSMLQLLNLSSTNVSGSIPPSFGQLSHLQLLDLSSNSLTGSIPAELGRLSSLQFLFLNSNRLTGSIPQHLANLTSLEVLCLQDNLLNGSIPSQLGSLTSLQQFRIGGNPYLTGQIPSQLGLLTNLTTFGAAATGLSGAIPSTFGNLINLQTLALYDTEISGSIPPELGLCSELRNLYLHMNKLTGSIPPQLSKLQKLTSLLLWGNALTGPIPAELSNCSSLVIFDVSSNDVSGQIPGDFGKLVVLEQLHLSDNSLTGKIPWQLSNCTSLSTVQLDKNQLSGTIPWELGKLKVLQSFFLWGNLVSGTIPSSFGNCTELFALDLSRNKLTGSIPEEIFSLKKLSKLLLLGNSLTGRLPPSVANCQSLVRLRVGENQLSGQIPKEIGQLQNLVFLDLYMNHFSGSIPVEIANITVLELLDVHNNYLTGEIPSVIGELENLEQLDLSRNSLTGEIPWSFGNFSYLNKLILNNNLLTGSIPKSIRNLQKLTLLDLGYNSLSGGIPPEIGHVTSLTISLDLSSNAFSGEIPDSVSALTQLQSLDLSQNMLYGDIKVLGSLTSLTSLNISYNNFSGPIPVTPFFRTLSSNSYLQNPQLCQSIDGTTCSSSLIRKNGLKSAKTIAVITVILASVTIILIASWILVTRNHGYKVEKTLGTLASSSRADDFSYPWTFIPFQKVNFNIDNILDCLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKASKADETVDSFAAEIQILGYIRHRNIVRLLGYCSNRSVNLLLYKYISNGNLRQLLQGNRNLDWETRYKIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKFEAYLADFGLAKMMHSQNYHHAMSRVAGSYACFITNAEYGYSMNITEKSDVYSYGVVLLEILSGRSAVESHVGDGQHIVEWVKRKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKNQPEEMGKTSQPLIKQSSNQS 1084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10252g00002 1084 PRINTS Leucine-rich repeat signature 535 548 - -
Mupr10252g00002 1084 PRINTS Leucine-rich repeat signature 129 142 - -
Mupr10252g00002 1084 Gene3D Ribonuclease Inhibitor 193 284 IPR032675 -
Mupr10252g00002 1084 SUPERFAMILY L domain-like 52 404 - -
Mupr10252g00002 1084 ProSitePatterns Protein kinases ATP-binding region signature. 791 814 IPR017441 GO:0005524
Mupr10252g00002 1084 SUPERFAMILY Protein kinase-like (PK-like) 767 1060 IPR011009 -
Mupr10252g00002 1084 FunFam Putative LRR receptor-like serine/threonine-protein kinase 434 703 - -
Mupr10252g00002 1084 SMART serkin_6 785 1063 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr10252g00002 1084 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 556 1054 - -
Mupr10252g00002 1084 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 863 1077 - -
Mupr10252g00002 1084 Gene3D Phosphorylase Kinase; domain 1 763 862 - -
Mupr10252g00002 1084 Pfam Protein tyrosine and serine/threonine kinase 788 1058 IPR001245 GO:0004672|GO:0006468
Mupr10252g00002 1084 Gene3D Transferase(Phosphotransferase) domain 1 863 1081 - -
Mupr10252g00002 1084 ProSitePatterns Serine/Threonine protein kinases active-site signature. 905 917 IPR008271 GO:0004672|GO:0006468
Mupr10252g00002 1084 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 31 209 - -
Mupr10252g00002 1084 Pfam Leucine rich repeat N-terminal domain 32 75 IPR013210 -
Mupr10252g00002 1084 SUPERFAMILY L domain-like 384 702 - -
Mupr10252g00002 1084 Pfam Leucine Rich Repeat 346 367 IPR001611 GO:0005515
Mupr10252g00002 1084 Pfam Leucine Rich Repeat 537 559 IPR001611 GO:0005515
Mupr10252g00002 1084 Pfam Leucine rich repeat 105 163 IPR001611 GO:0005515
Mupr10252g00002 1084 Pfam Leucine rich repeat 394 452 IPR001611 GO:0005515
Mupr10252g00002 1084 Gene3D Ribonuclease Inhibitor 285 383 IPR032675 -
Mupr10252g00002 1084 ProSiteProfiles Protein kinase domain profile. 785 1077 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr10252g00002 1084 SMART LRR_typ_2 126 150 IPR003591 -
Mupr10252g00002 1084 SMART LRR_typ_2 247 271 IPR003591 -
Mupr10252g00002 1084 SMART LRR_typ_2 343 367 IPR003591 -
Mupr10252g00002 1084 SMART LRR_typ_2 174 198 IPR003591 -
Mupr10252g00002 1084 SMART LRR_typ_2 415 439 IPR003591 -
Mupr10252g00002 1084 SMART LRR_typ_2 632 659 IPR003591 -
Mupr10252g00002 1084 SMART LRR_typ_2 583 607 IPR003591 -
Mupr10252g00002 1084 SMART LRR_typ_2 535 558 IPR003591 -
Mupr10252g00002 1084 SMART LRR_typ_2 295 319 IPR003591 -
Mupr10252g00002 1084 Gene3D Ribonuclease Inhibitor 576 703 IPR032675 -
Mupr10252g00002 1084 Gene3D Ribonuclease Inhibitor 33 192 IPR032675 -
Mupr10252g00002 1084 Gene3D Ribonuclease Inhibitor 384 479 IPR032675 -
Mupr10252g00002 1084 Gene3D Ribonuclease Inhibitor 480 575 IPR032675 -
Mupr10252g00002 1084 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 210 433 - -
Mupr10252g00002 1084 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 761 862 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10252g00002 Mupr-Chr10252 11346 14818 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10252g00002 28 1078 Receptor kinase-like Gene Family AT5G56040 44.695 0.0 837
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mupr10252g00002 PK_Tyr_Ser-Thr 3.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10252g00002 - - gmx:100819611 1882.46