Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10250g00003 ATGGAAGGTTTTGCCCCTCAGAGGATAAGTGACTGTTTTCAAGTGAGTTGTGATGTAATTGGAAATGGGTATGCTTCATCTTCTTCTCTAGTGTTGGATAAGGAGAAGGGAGCGCTTGTAGAGGCCCCTGTCAAATTGGAACGCAAGGGTGTGTCCCCTGAGAGAAGCATAGAAGCCTTGAAGAACCATAGTGAGGCAGAGCGGAGGAGGAGAGCAAGGATTAATACACATCTTGATACACTTCGCAGTTTCATCCCAGTTGCTAAGAAGGTGGACAAAGCAACCTTGCTGGGTGAGGTTATTAGACATTTGAAAGAGCTGAAAACGAATGCAGCACAAGCAAGTGAAGGCCTAATGATACCAAAGGACAATGATGAAATAAGAGTTGAAGAACAGGAGGGTGGGTTGAATGGTTTCCCTTACTCAATCAGGGCATCACTATGTTGTGAATATAAACCCGGGTTGTTGTCTGATATAAGACAAGCACTTGATGCACTTCATCTTATGATAATAAGGGCAGAGATTGCAACATTGGGGGGAAGGATGAAGAATGTGTTTGTGATAATTAGCTGCAAAGAACAAAACATTGAAGATGCTGAGTACCGTCAGTTTCTGGCTGGATCTGTTCACCAAGCTCTAAGATCTGTGTTAGATAGATTTTCTGTTTCACAGGACATGTTAGAAAGCAGGAAGAGAAGGAGGATTTCTATATTCAATTCTTCATCTTTAGCAGATTTCTTATAA 744 0.4207 MEGFAPQRISDCFQVSCDVIGNGYASSSSLVLDKEKGALVEAPVKLERKGVSPERSIEALKNHSEAERRRRARINTHLDTLRSFIPVAKKVDKATLLGEVIRHLKELKTNAAQASEGLMIPKDNDEIRVEEQEGGLNGFPYSIRASLCCEYKPGLLSDIRQALDALHLMIIRAEIATLGGRMKNVFVIISCKEQNIEDAEYRQFLAGSVHQALRSVLDRFSVSQDMLESRKRRRISIFNSSSLADFL 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10250g00003 247 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 58 107 IPR011598 GO:0046983
Mupr10250g00003 247 Gene3D - 54 116 IPR036638 GO:0046983
Mupr10250g00003 247 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 62 113 IPR036638 GO:0046983
Mupr10250g00003 247 Pfam Helix-loop-helix DNA-binding domain 62 107 IPR011598 GO:0046983
Mupr10250g00003 247 PANTHER TRANSCRIPTION FACTOR BHLH30 25 241 IPR045847 GO:0003700|GO:0006355
Mupr10250g00003 247 SUPERFAMILY ACT-like 146 224 IPR045865 -
Mupr10250g00003 247 SMART finulus 64 113 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10250g00003 Mupr-Chr10250 22417 24368 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10250g00003 45 245 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 38.537 2.10e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr10250g00003 HLH 6.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10250g00003 - - gmx:100783322 445.662