Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10247g00001 ATGACCACTTCTTTCTCTGACCTTCTTTCTTCTCCTTCTCCCACCGACAACAACCTTGGAGGCTCCGAAAGACCTCGCGAGTTGTCGGATCAAACAGGTTCTTCTGGGGTGCCCAAATTCAAGTCCACACCACCTCCCTCTCTCCCTCTCTCTCTCCCTCCTAACCACCCTCTCCCTCCCTTTTCTCCTTCTTACTTTGCCATCCCTCATGGGTTAAGCCTTGCTGAACTTCTTGACTCCCCGGTTCTTCTCCAGTCTTCTAACGTTTTGCCATCTCCAACAACTGGATCATATGCTGGTCAAGGCTTCAATTGGAAGAGCAGTTATGGGGAAAGCCAGCAGCATGTCAAAGAAGAAGACAAAACCTTCTCAAACTTCTCCTTCCAAACACAAAAACACCCTCCTCTTCCATCTTCAACTGGATTTCAATCTTCAACCGGCATAGTTCAAACCGGATGGAGTTTTCCAGAAACTTCTAAGCAAGCTGGTTTTTCATCAAGAATGAGTATGGTGAAAACTGAAACTACTTCTTCCATGCAGAGTTTCAACCCTGAGAATAACCACAAGAGTGGTTTTCAATCAGATTATAACAATTACCAGCCTCAACCACAAGTTCAGACTTTAAGCAGAAGGTCAGATGATGGGTACAATTGGAGGAAATATGGGCAAAAGCAAGTGAAAGGAAGTGAAAATCCAAGAAGCTACTACAAGTGCACATACCCCAATTGCCCAACAAAGAAAAAGGTTGAGAGGTCTTTAGATGGACAAATTACTGAGATAGTTTACAAAGGCAGTCATAACCATCCCAAGCCTCAGGCTAGCAAGAGGAACTCATTGTCTGCCCCATCACTTGCAGTTCCTCACTCAAATAATGTCGGAAATGAAATACCACACGCCACTCATCAAATGGATTCGGTTGCCACTCCAGAAAACTCATCAATATCAATGGAAGATGATGATTTTGGTCAGAGTAAATCAGGAGGAGATGAATTTGATAATGGTGAACCTGATGCCAAAAGATGGAGAATAGAAGGTGAAAATGAGGGAAGTAGAACAGTGAGAGAACCCAGAGTTGTGGTTCAGACAACCAGTGACATCGATATTCTAGATGATGGATACAGATGGAGGAAATATGGGCAGAAAGTAGTCAAGGGAAATCCAAATCCAAGGAGTTACTACAAGTGCACATACCCAGGATGTCCAGTGAGGAAGCACGTAGAGCGAGCTTCGCATGACCTAAGGGCAGTGATCACAACCTACGAGGGAAAGCACAACCATGACGTGCCTGCAGCACGTGGAAGTGGCAACAACTCTATCAATAGAACACTGCCAACCAATAACACAAACAATGGCACTAGTGTAGCCACTTCTATATACACTAACGTTAACAATTCTCTTCATCAGAGTCTTAGACCACCAGCACCAGAAAGGGCATCACACTTCAACCCCGACATGCAGCTGAGCTCAGCAAGTTTTGGATTCTCAGGGTTTGGGAATCCATTGATGGGGTCTTACATGAATCAACAATCTGACAATCTGTTCACCTCTAGAGCCAAGGAGGAGCCTGGAGATGACTCGTTTCTTGACTCTTTGCTATCTGTCATCCTATCCAAGTGGGTCATGACATCTGATCCACTTGAGGATGGGGTTAGAGCATAG 1659 0.4485 MTTSFSDLLSSPSPTDNNLGGSERPRELSDQTGSSGVPKFKSTPPPSLPLSLPPNHPLPPFSPSYFAIPHGLSLAELLDSPVLLQSSNVLPSPTTGSYAGQGFNWKSSYGESQQHVKEEDKTFSNFSFQTQKHPPLPSSTGFQSSTGIVQTGWSFPETSKQAGFSSRMSMVKTETTSSMQSFNPENNHKSGFQSDYNNYQPQPQVQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSLDGQITEIVYKGSHNHPKPQASKRNSLSAPSLAVPHSNNVGNEIPHATHQMDSVATPENSSISMEDDDFGQSKSGGDEFDNGEPDAKRWRIEGENEGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTYPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGNNSINRTLPTNNTNNGTSVATSIYTNVNNSLHQSLRPPAPERASHFNPDMQLSSASFGFSGFGNPLMGSYMNQQSDNLFTSRAKEEPGDDSFLDSLLSVILSKWVMTSDPLEDGVRA 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10247g00001 552 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 78 452 IPR044810 GO:0003700
Mupr10247g00001 552 Gene3D WRKY domain 200 272 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr10247g00001 552 MobiDBLite consensus disorder prediction 431 450 - -
Mupr10247g00001 552 MobiDBLite consensus disorder prediction 271 298 - -
Mupr10247g00001 552 MobiDBLite consensus disorder prediction 425 450 - -
Mupr10247g00001 552 ProSiteProfiles WRKY domain profile. 213 271 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr10247g00001 552 MobiDBLite consensus disorder prediction 1 61 - -
Mupr10247g00001 552 MobiDBLite consensus disorder prediction 159 216 - -
Mupr10247g00001 552 MobiDBLite consensus disorder prediction 1 41 - -
Mupr10247g00001 552 MobiDBLite consensus disorder prediction 42 61 - -
Mupr10247g00001 552 ProSiteProfiles WRKY domain profile. 364 429 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr10247g00001 552 MobiDBLite consensus disorder prediction 304 320 - -
Mupr10247g00001 552 SUPERFAMILY WRKY DNA-binding domain 361 429 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr10247g00001 552 Gene3D WRKY domain 356 422 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr10247g00001 552 FunFam WRKY transcription factor 33 356 422 - -
Mupr10247g00001 552 FunFam WRKY transcription factor 202 272 - -
Mupr10247g00001 552 SUPERFAMILY WRKY DNA-binding domain 211 271 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr10247g00001 552 SMART WRKY_cls 369 428 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr10247g00001 552 SMART WRKY_cls 212 270 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr10247g00001 552 MobiDBLite consensus disorder prediction 263 353 - -
Mupr10247g00001 552 MobiDBLite consensus disorder prediction 159 212 - -
Mupr10247g00001 552 MobiDBLite consensus disorder prediction 322 353 - -
Mupr10247g00001 552 Pfam WRKY DNA -binding domain 370 426 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr10247g00001 552 Pfam WRKY DNA -binding domain 213 269 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10247g00001 Mupr-Chr10247 13241 17060 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10247g00001 1 435 WRKY Transcription Factor Family AT2G38470 48.723 5.35e-109 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mupr10247g00001 WRKY 2.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10247g00001 K13424 - gmx:100127397 859.366