Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10246g00002 ATGGCATCTTCTTCTGGTAGTTTAGACACCTCTGCAACTGCAAACTCCTTTGCCAACTTCACCTTCTCCACACACTCATTCATGACCACTTCCTTCTCCGACCTTCTTGCTTCTCCCACTGACAACAACAACAACAAGCCACAGGGCTTGTCTGGTGTGCCAAAATTCAAGTCTACACCGCCACCATCTCTGCCTCTCTCTCCTCCCCCCATTTCTCCTTCTTCTTACTTTGCTATTCCACCTGGTTTGAGCCCTGCTGAGCTTCTTGACTCACCCGTTCTCCTTAACTCTTCTAACATTCTGCCATCTCCAACAACCGGAGCATTTGTTTCTCAGAGCTTCAATTGGAAGAACAGTTCAGGGGGAAACCAGCAACTTGTCAAAGAAGAAGACAAAAGCTTCTCAAATTTCTCTTTCCAAACACAACCAGCACCTTCTGCTTCATCCACGGCAACATTTCAATCTTCAAATGTTTCAGTTCAAACACAACAGCCATGGAGTTTCCAGGAGGCCACAAAGCAGGATAATTTTTCTTCAAGAAAGAGTATGATGAAAACTGAAAACTCTTCTTCCGTGCAGAGTTTTCCTCCTGAGATTGCTAGTGTCCAAACTAACCATAACAATGGGTTTCAATCGGATTATGGCAATTACCCCCCACAATCTCAGACCTTAAGCAGAAGGTCAGATGATGGGTACAATTGGAGGAAATATGGCCAAAAACAAGTGAAAGGAAGTGAAAATCCAAGAAGTTATTATAAATGCACATACCCCAATTGCCCTACAAAGAAAAAGGTTGAGAGGTCTTTAGATGGACAAATTACTGAGATAGTTTATAAGGGTACTCATAACCATCCCAAGCCTCAGTCTACTAGGAGAAACTCATCCTCCTCATCTTCCATTGCTATCCCTCCTTCAAATCCCATCAGCACTGAAATCCCAGATCACTCATATGCCACACATGGCAGTGGACAAATGGATTCAGCTGCCACCCCAGAGAACTCATCAATATCAATAGGAGATGATGATTTTGAACAGAGTTCTCAAAAGTGTAAATCAGGAGGAGAAGAGTTTGATGAGGATGAACCCGATGCCAAAAGATGGAAAATTGAAGGTGAAAATGAGGGTATGTCAGCGCCTGGAAGTAGAACAGTAAGAGAACCTAGAGTTGTAGTTCAGACAACCAGTGACATTGATATCCTAGATGATGGGTACAGATGGAGAAAATACGGGCAGAAAGTAGTGAAGGGCAATCCAAATCCAAGGAGTTACTACAAGTGTACACACTCAGGGTGTCCAGTGAGGAAGCACGTGGAACGAGCCTCACATGACTTAAGGGCTGTGATCACAACCTATGAGGGAAAGCACAACCATGATGTTCCTGCAGCCCGTGGCAGTGGCAGCCATTCTGTTAACAGACCACTGCCAAACAATGCTGCAAACCCCACCACAGCAGCCACAGCCATAAGGCCCTTGCCAGTGATCCACCACACTGACAATTCTCTCCAGAATCAAAGACCACAAGCCCCACCAGAAGGGCAATCACCCTTCACCATAGACATGCTACAGAGTCCAGGAAGTTTTGGATTCTCAGGGTTTGGAAATCCAATGGGGTCTTACATGAATCAACAACAACTATCTGATAATGTTTTCTCCTCCAGAGCCAAGGAGGAGCCCAGAGATGACTTGTTCCTTGAATCTCTACTATGCTGA 1710 0.4491 MASSSGSLDTSATANSFANFTFSTHSFMTTSFSDLLASPTDNNNNKPQGLSGVPKFKSTPPPSLPLSPPPISPSSYFAIPPGLSPAELLDSPVLLNSSNILPSPTTGAFVSQSFNWKNSSGGNQQLVKEEDKSFSNFSFQTQPAPSASSTATFQSSNVSVQTQQPWSFQEATKQDNFSSRKSMMKTENSSSVQSFPPEIASVQTNHNNGFQSDYGNYPPQSQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSLDGQITEIVYKGTHNHPKPQSTRRNSSSSSSIAIPPSNPISTEIPDHSYATHGSGQMDSAATPENSSISIGDDDFEQSSQKCKSGGEEFDEDEPDAKRWKIEGENEGMSAPGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHSGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSHSVNRPLPNNAANPTTAATAIRPLPVIHHTDNSLQNQRPQAPPEGQSPFTIDMLQSPGSFGFSGFGNPMGSYMNQQQLSDNVFSSRAKEEPRDDLFLESLLC 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10246g00002 569 Gene3D WRKY domain 216 288 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr10246g00002 569 FunFam WRKY transcription factor 33 387 453 - -
Mupr10246g00002 569 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 89 495 IPR044810 GO:0003700
Mupr10246g00002 569 SUPERFAMILY WRKY DNA-binding domain 227 287 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr10246g00002 569 MobiDBLite consensus disorder prediction 203 232 - -
Mupr10246g00002 569 SMART WRKY_cls 400 459 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr10246g00002 569 SMART WRKY_cls 228 286 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr10246g00002 569 SUPERFAMILY WRKY DNA-binding domain 392 460 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr10246g00002 569 MobiDBLite consensus disorder prediction 203 228 - -
Mupr10246g00002 569 FunFam WRKY transcription factor 219 288 - -
Mupr10246g00002 569 MobiDBLite consensus disorder prediction 456 482 - -
Mupr10246g00002 569 MobiDBLite consensus disorder prediction 344 365 - -
Mupr10246g00002 569 MobiDBLite consensus disorder prediction 34 52 - -
Mupr10246g00002 569 Gene3D WRKY domain 387 453 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr10246g00002 569 MobiDBLite consensus disorder prediction 283 343 - -
Mupr10246g00002 569 Pfam WRKY DNA -binding domain 401 457 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr10246g00002 569 Pfam WRKY DNA -binding domain 229 285 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr10246g00002 569 ProSiteProfiles WRKY domain profile. 395 460 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr10246g00002 569 ProSiteProfiles WRKY domain profile. 229 287 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr10246g00002 569 MobiDBLite consensus disorder prediction 278 365 - -
Mupr10246g00002 569 MobiDBLite consensus disorder prediction 34 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10246g00002 Mupr-Chr10246 6749 10043 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10246g00002 1 568 WRKY Transcription Factor Family AT2G38470 44.576 1.78e-120 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mupr10246g00002 WRKY 1.7e-25 CL0274