Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10244g00013 TTAGGGAGGTGTGGTTGTTATTGTTGTAATTTGTGGAGTGTTCGAGAATTGACTAGAAAGAAGGAAAGAAAAACGTTGGCAGACATGGTGGAGCTGTCGGACGAGGATGAACTCGACGAGGAGCCCGGCGAGGTCATCGAATCGGCACCGCCACAGAAGGTTGGCGAAGAGAGACAACTCAGCGGTTTCAAGAAGAAGCTTCTCAAACGTGGACACGGATGGGAAACCCCCAACTTCAACGACCTCGTAACCGTTCACTGTGTTGGAACCTTTCTCGATGGAACAACGTTGGATTCCACTAGGGACACGGATCGACCTAGGACGTTCACTCTTGGCCAAGGTGACGTCGCTGGGTTGGACCGTGGGATTGTCACTATGAAGAAAGGGGAGGTGGCATTGTTCACGTTACCTGGAGGTAATGGTGGAGATATTTTGCATAACTCCAACTCGGTTGTGCAGTTTGAGGTGGAACTCGTTTCATGGATCACGGTGGTGGATGTTTGCAAAGATGGTGGAGTTCTCAAGAAAATTTTGGAGAAAGGGAACGGGAATGACCGCCCTGCTGATCTTGATGAAGTGCTTGTGAAGTATCAGGTGGCGCTTGTTGATGGCACTGTTGTTGCAGAGACCCTGGAAGGAGGAGTTGAGTTTCACGTGAAGGATGATGCCTTTGGGGAGAAGGGGAGAGAAGCTGGCAGTGGGTTCTGTTCAATTCCTCCAAATTCAGTGCTGCATGTTAATATTGAATTGGTATCTTTCAAGCCTGTCATAAATGTCACTGGTGATTCCAAGGTGCTTAAGAAGATTTTGAAAGAAGGGGAGGGTGCTTTCACGGCCAATGAGGGTGCAAATGTTACCGTCAGCTTCACAGCTATGCTAGAAGATGGCACTGTATTTGAGGAAAGAGGAATTGGTGAAACACAACCCTTGGAATTCATTACTGATGAGGAACAAGTGCTTACTGGTCTAGACCGAGCTGTGGCAACAATGAAGAAGGGTGAGAGGGCCATAATTAGCATACATCCTGATTATGCATTTGGAAATGTTGAAGTGAGACGAGATCTTGCTATTGTGCCACCAGGCTCAAATGTAGTCTATGACGTTGAGATGATGGATTTTATTAAGGAGAAAGCACCATGGGAATTGAATAGTAAGGAGAAAATTGAAGAGGCTGAGAGGAAGAAAGAAGAAGGAAATGTATTGTTTAAAGGTGGCCATTATCAGCGAGCAGGGAAGAAGTATGAAAAGGCTGCTGATTTTGTTAGTGAAGATGGATCCTTTGGGGATGATGAGCAAAAGCAAGCTAAGGCACTGAGAGTGTCATGCTGGTTGAATGGTGCAGCTTGTAGCCTTAAACTTAGTGACTTTCCTGGAGCAATCAAGCTATGTTCACAGGTGCTTGATGTTGAATTTTGCAATGTGAAAGCTTTGTACAGACGAGCACAAGCATATATAGAAACTGGAGACTTCCTTTTAGCAGATGTAGACATCAAGAAAGCTCTTGAGGTGGACCCACAAAACAGGGAGGTAAAGGTAATTCAGAAGAAATTGAAGCAACTTCAAGCTGACAGTGACAAAAAAGATGCTAAGCTATACGGAAACATGTTTGCACGTAAAACAAAGGACTCGGCTGTAAAGAGATTGAAGGTTGAGAAAGATGAGAGGGAAAATGAAGAGGTTGCAAGAATAGAAATGGAGAAAGTTGCTGATAGCGCAGTGAGTTAA 1725 0.451 LGRCGCYCCNLWSVRELTRKKERKTLADMVELSDEDELDEEPGEVIESAPPQKVGEERQLSGFKKKLLKRGHGWETPNFNDLVTVHCVGTFLDGTTLDSTRDTDRPRTFTLGQGDVAGLDRGIVTMKKGEVALFTLPGGNGGDILHNSNSVVQFEVELVSWITVVDVCKDGGVLKKILEKGNGNDRPADLDEVLVKYQVALVDGTVVAETLEGGVEFHVKDDAFGEKGREAGSGFCSIPPNSVLHVNIELVSFKPVINVTGDSKVLKKILKEGEGAFTANEGANVTVSFTAMLEDGTVFEERGIGETQPLEFITDEEQVLTGLDRAVATMKKGERAIISIHPDYAFGNVEVRRDLAIVPPGSNVVYDVEMMDFIKEKAPWELNSKEKIEEAERKKEEGNVLFKGGHYQRAGKKYEKAADFVSEDGSFGDDEQKQAKALRVSCWLNGAACSLKLSDFPGAIKLCSQVLDVEFCNVKALYRRAQAYIETGDFLLADVDIKKALEVDPQNREVKVIQKKLKQLQADSDKKDAKLYGNMFARKTKDSAVKRLKVEKDERENEEVARIEMEKVADSAVS 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10244g00013 574 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 80 137 IPR001179 GO:0003755
Mupr10244g00013 574 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 75 158 IPR001179 GO:0003755
Mupr10244g00013 574 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 278 370 IPR001179 GO:0003755
Mupr10244g00013 574 SUPERFAMILY FKBP-like 143 254 - -
Mupr10244g00013 574 Gene3D - 53 166 IPR046357 GO:0003755
Mupr10244g00013 574 SUPERFAMILY FKBP-like 31 163 - -
Mupr10244g00013 574 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 282 374 IPR001179 GO:0003755
Mupr10244g00013 574 Gene3D Tetratricopeptide repeat domain 379 534 IPR011990 GO:0005515
Mupr10244g00013 574 Coils Coil 510 530 - -
Mupr10244g00013 574 PANTHER PEPTIDYLPROLYL ISOMERASE 61 160 - -
Mupr10244g00013 574 FunFam Peptidylprolyl isomerase 379 534 - -
Mupr10244g00013 574 SUPERFAMILY FKBP-like 260 392 - -
Mupr10244g00013 574 SMART tpr_5 474 507 IPR019734 GO:0005515
Mupr10244g00013 574 SMART tpr_5 391 424 IPR019734 GO:0005515
Mupr10244g00013 574 SMART tpr_5 440 473 IPR019734 GO:0005515
Mupr10244g00013 574 Gene3D - 254 378 IPR046357 GO:0003755
Mupr10244g00013 574 ProSiteProfiles TPR repeat profile. 474 507 IPR019734 GO:0005515
Mupr10244g00013 574 MobiDBLite consensus disorder prediction 32 53 - -
Mupr10244g00013 574 FunFam Peptidylprolyl isomerase 255 376 - -
Mupr10244g00013 574 SUPERFAMILY TPR-like 384 536 IPR011990 GO:0005515
Mupr10244g00013 574 Gene3D - 167 224 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10244g00013 Mupr-Chr10244 20474 26777 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10244g00013 53 538 Calmodulin-binding Proteins AT3G25230 53.359 1.34e-179 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10244g00013 K09571 - gmx:100798382 895.19