Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10240g00003 ATGGCTCTTATGCAATATCAAGCAGACTCTACTGGTGGCATGTCTCCAGGAGCTATTGCTGCAATTGTGGTTGCATCAGTGATTTTTGTCATCTTGTTTGTTGTTGGCATAATTTGGTGGAGGGGTTTCCTAGGAAAGAAACATTTAGTAATGGAAGAGCTAAGGGGTTTAGATCTACAAACTAGTTTATTTACCTTACATCAAATCAAAGTTGCAACTAATAACTTTGATATTTCCAATAAGATTGGAGAAGGAGGCTTTGGTCCTGTCTATAAGGGAATTCTGGCAAACAGCACTACAATAGCAGTCAAACAACTTTCATCTAAATCAGAACAAGGAACACGCGAGTTTATCAATGAGATAGGCATGATCTCTGCTTTGCAACATCCTAATCTTGTTAAACTTTATGGCTGTTGTGTTGAGGGAGATCAACTGTTGTTGGTATATGAATATATGGAAAACAATAGCCTTGCACGTGCTTTATTTCAAGATAGCTATTTAAAATTGAATTGGCCGACAAGGAAGAAGATTTGTGTTGGTATTGCAAGGGGTTTAGCATTCCTGCATGAACATTCAAGACTGAAAGTTGTTCATAGGGACTTGAAGACCTCTAATGTATTGCTTGATGAACACCTAAACCCAAAGATATCTGATTTTGGTTTGGCCAGGCTTCATGAGGGGGACAATACTCACATAAGCACCAGAGTTGCAGGGACTTGGGGATATATGGCTCCTGAGTATGCAATGCATGGTTATCTAACCGATAAAGCAGATGTTTATAGTTTTGGAGTTGTTGTCTTGGAAATTGTAAGTGGAAAGAGAAACACTATTCATCAGTCAAAGGAAGAAGCATTCTATCTTCTTGATTGGGCAAGTTTGTTGAAAGACAAAGGTAACATAATGGAGCTAGTTGATCCAGGGTTGGGTTTAGATTACAACGCAGAGGAGGTAATGCTGATGGTCAAAGTGGGTCTCCTATGCACCAATGTCACTTCAACTCTTAGGCCCTCCATGTCTTCGGTGCTAAGCATGCTTGAGGGCACAACAATGGTCCCAGAATGTGTTGGACATTCAAGTGAGGTAATGAATGAGATGAAATTGGAGGCAATGAGAGAGTTTTACAGTCAAATGGCAGAAAATAGAATAAGTGAGGCACGAAGTCTGAGCTTGACAATTGATGTTCCATGGACTGGTTCATCTTCATCAGCTGCAGACCTCAATCCTGCTCACCTTGATTCTTCTTACTGGAAGAAAAAGAAATTAAGAGAGTCTTTATGA 1278 0.3991 MALMQYQADSTGGMSPGAIAAIVVASVIFVILFVVGIIWWRGFLGKKHLVMEELRGLDLQTSLFTLHQIKVATNNFDISNKIGEGGFGPVYKGILANSTTIAVKQLSSKSEQGTREFINEIGMISALQHPNLVKLYGCCVEGDQLLLVYEYMENNSLARALFQDSYLKLNWPTRKKICVGIARGLAFLHEHSRLKVVHRDLKTSNVLLDEHLNPKISDFGLARLHEGDNTHISTRVAGTWGYMAPEYAMHGYLTDKADVYSFGVVVLEIVSGKRNTIHQSKEEAFYLLDWASLLKDKGNIMELVDPGLGLDYNAEEVMLMVKVGLLCTNVTSTLRPSMSSVLSMLEGTTMVPECVGHSSEVMNEMKLEAMREFYSQMAENRISEARSLSLTIDVPWTGSSSSAADLNPAHLDSSYWKKKKLRESL 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10240g00003 425 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 18 379 - -
Mupr10240g00003 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Mupr10240g00003 425 Pfam Protein tyrosine and serine/threonine kinase 78 285 IPR001245 GO:0004672|GO:0006468
Mupr10240g00003 425 Gene3D Transferase(Phosphotransferase) domain 1 152 363 - -
Mupr10240g00003 425 Gene3D Phosphorylase Kinase; domain 1 45 151 - -
Mupr10240g00003 425 ProSiteProfiles Protein kinase domain profile. 76 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr10240g00003 425 FunFam Putative LRR receptor-like serine/threonine-protein kinase 152 357 - -
Mupr10240g00003 425 CDD STKc_IRAK 82 347 - -
Mupr10240g00003 425 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 45 151 - -
Mupr10240g00003 425 SUPERFAMILY Protein kinase-like (PK-like) 60 355 IPR011009 -
Mupr10240g00003 425 SMART serkin_6 76 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10240g00003 Mupr-Chr10240 15093 17851 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10240g00003 5 402 Receptor kinase-like Gene Family AT1G53430 60.976 1.81e-164 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr10240g00003 PK_Tyr_Ser-Thr 1.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10240g00003 - - gmx:100791136 680.633