Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10231g00006 ATGACAGCTCTTCTTCACCGTCACTCCCTCCCTCCCTTGGCCCTCACCTCACACACTTCTCACTCCCAAATTCAAACTCCTGCTAGGGGCTTCCAACTTCCCTCTAATTCTCCCTGTAATGCACTGCGATTCCCGGGTCCTACCATGGAACCAGCCGCAATGTACGGACACTCCCAGCCCATGAATATGCCCCCGCAGATCGCCGCCGCCGAAAGCGACGACGGCTCCGGCGCCGAGCCCGCCATCAACGCCCACCACCACATTCACTACGACGCCCACGCGCTCGAAGACGGTGCCGCCGCCGTGGTCGTCGAGGATGTTACCTCCGATGCGGTCTACGTTTCCGGCGGCGGAGGACCCGAAGAGTCCAGCCAGCTTACGCTGTCGTTTCGCGGCCAAGTTTACGTTTTTGATGCCGTTACGCCTGACAAGGTTCAAGCGGTGTTGTTACTGTTGGGTGGTTGTGAACTATCTGCAAGTGGTTCCGCATGTGTGGATGCTGTGTCTCAACAGAACCAGAGGGGTTCAACAGAATATCCTGCAAGATGTAGTCTACCACAGCGAGCTGCCTCGTTAGATAGGTTCAGGCAGAAGAGGAAAGAGCGATGCTATGATAAAAAAGTGAGATATAGTGTACGGCAAGAGGTTGCGCTCAGGATGCACCGAAATAAGGGTCAATTCACTTCATCTAAGAAACAGGATGGAGCTAATAGCTGGGGTACAGACCGAGATTCAGGACAGGATGATAGTCAGTCAGAAGCCTCATGCACACATTGTGGCATCAGTTCAAAATCCACCCCGATGATGAGGCGAGGGCCATCTGGTCCAAGGTCGCTTTGCAATGCTTGTGGGCTTTTTTGGGCAAATAGGGGTGCTTTGAGAGATCTTTCAAAGAGAAATCAGGAACACTCTCTTCCACCAGTTGAGCAGGTTGATGAAGGTAATGATTTGGACTGTCGGACTGCCGCCAACCCTGCACATAACAATCTTGCTGCCTTCTCAGAGGCATGA 1011 0.5331 MTALLHRHSLPPLALTSHTSHSQIQTPARGFQLPSNSPCNALRFPGPTMEPAAMYGHSQPMNMPPQIAAAESDDGSGAEPAINAHHHIHYDAHALEDGAAAVVVEDVTSDAVYVSGGGGPEESSQLTLSFRGQVYVFDAVTPDKVQAVLLLLGGCELSASGSACVDAVSQQNQRGSTEYPARCSLPQRAASLDRFRQKRKERCYDKKVRYSVRQEVALRMHRNKGQFTSSKKQDGANSWGTDRDSGQDDSQSEASCTHCGISSKSTPMMRRGPSGPRSLCNACGLFWANRGALRDLSKRNQEHSLPPVEQVDEGNDLDCRTAANPAHNNLAAFSEA 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10231g00006 336 Pfam CCT motif 188 230 IPR010402 GO:0005515
Mupr10231g00006 336 MobiDBLite consensus disorder prediction 229 269 - -
Mupr10231g00006 336 MobiDBLite consensus disorder prediction 14 36 - -
Mupr10231g00006 336 MobiDBLite consensus disorder prediction 221 274 - -
Mupr10231g00006 336 ProSitePatterns GATA-type zinc finger domain. 256 283 IPR000679 GO:0006355|GO:0043565
Mupr10231g00006 336 CDD ZnF_GATA 255 301 IPR000679 GO:0006355|GO:0043565
Mupr10231g00006 336 SMART GATA_3 250 303 IPR000679 GO:0006355|GO:0043565
Mupr10231g00006 336 PANTHER GATA TRANSCRIPTION FACTOR 28 57 313 IPR045280 GO:0006355
Mupr10231g00006 336 SMART tify_2 119 154 IPR010399 -
Mupr10231g00006 336 Pfam tify domain 120 153 IPR010399 -
Mupr10231g00006 336 ProSiteProfiles GATA-type zinc finger domain profile. 250 301 IPR000679 GO:0006355|GO:0043565
Mupr10231g00006 336 Pfam GATA zinc finger 256 291 IPR000679 GO:0006355|GO:0043565
Mupr10231g00006 336 ProSiteProfiles Tify domain profile. 119 154 IPR010399 -
Mupr10231g00006 336 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 253 302 - -
Mupr10231g00006 336 Gene3D - 246 304 IPR013088 GO:0006355|GO:0008270
Mupr10231g00006 336 ProSiteProfiles CCT domain profile. 188 230 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10231g00006 Mupr-Chr10231 53593 58325 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10231g00006 66 334 Tify Gene Family AT4G24470 51.515 1.38e-91 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mupr10231g00006 CCT 1.1e-14 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10231g00006 - - pvu:PHAVU_008G182900g 521.931