Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10223g00001 ATGAGAATCTTTCTCTATTTGCACACAGATCCTGAAGCTGAAGTCATAGCCTTATCACCAAAGACCCTCATGGCTACCAACAGATTCTTGTGTGAAACTTGTGGGAAGGGCTTCCAGAGGGATCAAAATCTTCAACTCCATCGACGTGGACACAACCTTCCTTGGAAGCTTAAGCAGAGAACGGGGAAGGAAGCCAGGAAGAGGGTTTATGTGTGTCCTGAAAAGAGTTGTGTCCACCACGACCCTTCAAGGGCTCTTGGAGACTTAACTGGGATAAAGAAGCACTTTTGCAGAAAGCACGGTGAAAAGAAGTGGAAGTGCGAGAAGTGCTCAAAGCGTTATGCTGTGCAGTCAGATTGGAAAGCCCACTCCAAAACCTGTGGCACCAGAGAATACAAATGTGACTGTGGAACTATCTTTTCACGGAGAGATAGCTTCATCACTCACAGGGCCTTCTGTGATGCCTTGGCAGAAGAAACAGCTAGGGTAAATGCATCATCAGACATGAACACCTCGTTAGGGGGTAACATTGGTTACAACGTAATGGGAACATCCCTAGGCCACCACAACTTGGCAACCCATTTCCCCTCAATTTTCAAGCCAGTTTCAAGCACAGACGAAACAAGTAACCAAACATCTAAGGGACTACCCTTTTGGATGGGTCAAACATCTTCTCAGGCTCAAGAAACAATGGTCAACAGCAATTTGCATGAGATTCATCATCTAGGGTCTTCCACAAGCTCAGCAACAATATATGGTGGCAACTCACTTCTCCAATGCTCAAATCTTCAACCTTCTAATAACTATCAACTAAGTTGGGTATTTGGACCTAAACTTTCAAACAATAACAACCAAGAGCTAACAACTAGCACCACTTCACTTCCTCTATGCAACACAAGTGTTCCTTCTTTGTATAGCTCCCAACACCAACCCCACCAAACACCTTCATCAGCAAACATGTCAGCAACTGCTTTGTTGCAGAAAGCTGCTCAAATTGGAGCAACCTCAAGTGACCCTTCGTGGCTTGGGAGCTTAGGTTTGAAATGTGGTAACAGCCAAGGTCAAGATGGGAATAATAACAAGTTCAGTGACATGTACGGTTCAAGTTTGGTGCTCACCACTCTTGGAAGTGAGGCAGATAACTCTGCATGTGACATGTCACAAATGCACCCTCACAAACGTAGACACGTACTCAATGAGGAAAGTGGAGGGGGGCAAACTAGGGATTTCCTTGGTGTTGGTGTGCAAAACCATTTGCCACCATTCCTCAACCAAAGGGTGGACTTGATTTGA 1293 0.4524 MRIFLYLHTDPEAEVIALSPKTLMATNRFLCETCGKGFQRDQNLQLHRRGHNLPWKLKQRTGKEARKRVYVCPEKSCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEETARVNASSDMNTSLGGNIGYNVMGTSLGHHNLATHFPSIFKPVSSTDETSNQTSKGLPFWMGQTSSQAQETMVNSNLHEIHHLGSSTSSATIYGGNSLLQCSNLQPSNNYQLSWVFGPKLSNNNNQELTTSTTSLPLCNTSVPSLYSSQHQPHQTPSSANMSATALLQKAAQIGATSSDPSWLGSLGLKCGNSQGQDGNNNKFSDMYGSSLVLTTLGSEADNSACDMSQMHPHKRRHVLNEESGGGQTRDFLGVGVQNHLPPFLNQRVDLI 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10223g00001 430 FunFam protein indeterminate-domain 5, chloroplastic-like 83 162 - -
Mupr10223g00001 430 SUPERFAMILY beta-beta-alpha zinc fingers 28 125 IPR036236 -
Mupr10223g00001 430 FunFam protein indeterminate-domain 12-like 8 76 - -
Mupr10223g00001 430 Gene3D Classic Zinc Finger 25 52 - -
Mupr10223g00001 430 Gene3D Classic Zinc Finger 62 153 - -
Mupr10223g00001 430 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 8 414 IPR031140 -
Mupr10223g00001 430 ProSiteProfiles Zinc finger C2H2 type domain profile. 29 51 IPR013087 -
Mupr10223g00001 430 ProSitePatterns Zinc finger C2H2 type domain signature. 31 51 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10223g00001 Mupr-Chr10223 4124 6548 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10223g00001 3 416 IDZ Gene Family AT5G44160 51.786 3.28e-130 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr10223g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10223g00001 K25870 - gmx:100790620 747.273