Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10222g00001 ATGACCAAACCCAACAATTTCTTTCGCAACCTCATCAAGCCCTTCAAATTCAGTTCCAGCAATGAAGAACAGAGCGAAAACGACAACATACAGAACATAGCTGCACAGGAACAGAAGATCTTCCCCTTCGAAACATTGGTTGCTGCTACTAAGAATTTTCACATTCTTAACAAGCTAGGCGAGGGAGGATTTGGTCCCGTCTTTAAGGGGAAATTGAATGATGGGAGAGAGATTGCAGTGAAGAAGTTATCGCAAAGATCGAGTCAAGGGAAGACGCAATTCATCAACGAGGCCAAGTTGTTGGCACGTGTGCAGCACCGTAATGTGGTGAATTTGTTCGGTTATTGTGCCCATGGCTCCCAAAAGCTTCTTGTTTATGAGTATGTCCCTCGCGAGAGCCTTGACAAGCTTCTCTTCAAATCCCACAAGAGAGAAGTGCTAGATTGGAAGCGTAGATTTGACATAATCAATGGGGTGGCAAGGGGGTTGCTTTATCTTCACGAAGACTCTCACAATTGCATAATCCATCGCGACATAAAGGCAAGTAACATCTTACTCGATGAAAAATGGGTGCCCAAGATTGCAGATTTTGGCCTTGCTCGCCTCTTCCCCGAAGACCAAACCCACGTCCACACACGTGTGGCTGGAACCAATGGGTATTTGGCTCCGGAGTATTTGATGCATGGACATTTATCCGTGAAGGCAGACGTATATAGCTATGGGGTTTTGTTGTTGGAGTTGATCAGTGGCCAGCGAAATTCATCGTTTGATTTGGACGTGAATCTCCTTGAGTGGGCATACAAACTATACAAGAAAGGGAGGGCATTAGAAATAGTGGACCCAATATTGGCATCTTCAGCGTCACCGGAACAAGTAGTAATGTGCATACAACTGGGTCTGCTCTGCATTCAAGGTGAGCCGCAACAGCGTCCAACAATGGGGCGAGTGGTGGTGATGTTGTCGAAGAAACCAGGGCACATGGAAGAACCAACAAGACCAGGAGTACCAGGTTCGAGGTACAGAAGGAAACCTCGTACTCGCACACCCTTTGCAATGTCATCTTCTATGGAAACTTCTGCGGGTGATGATGACTCTGGTTCGCGCACTTTCGATTCCAGCAATAATGATGCCACTCATACTACTTCTGCAACCGCAACAACAAGCTCCAATTCTACCGCAGAAGTAGACCCGCGAGGGAAACGACCAATGCGTCATTAG 1218 0.468 MTKPNNFFRNLIKPFKFSSSNEEQSENDNIQNIAAQEQKIFPFETLVAATKNFHILNKLGEGGFGPVFKGKLNDGREIAVKKLSQRSSQGKTQFINEAKLLARVQHRNVVNLFGYCAHGSQKLLVYEYVPRESLDKLLFKSHKREVLDWKRRFDIINGVARGLLYLHEDSHNCIIHRDIKASNILLDEKWVPKIADFGLARLFPEDQTHVHTRVAGTNGYLAPEYLMHGHLSVKADVYSYGVLLLELISGQRNSSFDLDVNLLEWAYKLYKKGRALEIVDPILASSASPEQVVMCIQLGLLCIQGEPQQRPTMGRVVVMLSKKPGHMEEPTRPGVPGSRYRRKPRTRTPFAMSSSMETSAGDDDSGSRTFDSSNNDATHTTSATATTSSNSTAEVDPRGKRPMRH 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10222g00001 405 FunFam Cysteine-rich receptor-like protein kinase 10 16 128 - -
Mupr10222g00001 405 Gene3D Phosphorylase Kinase; domain 1 15 128 - -
Mupr10222g00001 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Mupr10222g00001 405 Gene3D Transferase(Phosphotransferase) domain 1 129 331 - -
Mupr10222g00001 405 Pfam Protein kinase domain 53 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr10222g00001 405 SMART serkin_6 53 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr10222g00001 405 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 25 381 - -
Mupr10222g00001 405 ProSiteProfiles Protein kinase domain profile. 53 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr10222g00001 405 CDD STKc_IRAK 59 322 - -
Mupr10222g00001 405 MobiDBLite consensus disorder prediction 348 395 - -
Mupr10222g00001 405 MobiDBLite consensus disorder prediction 321 405 - -
Mupr10222g00001 405 FunFam Cysteine-rich receptor-like protein kinase 10 130 332 - -
Mupr10222g00001 405 SUPERFAMILY Protein kinase-like (PK-like) 38 340 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10222g00001 Mupr-Chr10222 349 5856 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10222g00001 41 334 Receptor kinase-like Gene Family AT4G11530 50.836 4.07e-106 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr10222g00001 Pkinase 4.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10222g00001 - - gmx:100811523 632.098