Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10218g00010 ATGGATTTGGCCTCCACCTCGGCCACGCACGTGTCTAAATCCACTCTCTTTCTTTTTATCCTTTCACGCTATAAAACCCAACCAGTGTGTCCTCTCTCATACGTTTCAAGTCGCAGAGCAAAGCAAAGCAAAGCAGAGCCAACAACAATCACTACCAAGAAGAAGAAGAAGAAAAAAAAGAGGCTTGCAAATAAGAAGATTTTAGTTAAAGGGAACGCATTAGAAGAAACGCGAATGAAGGGTGAATTAGAGTTGCCACCTGGGTTCAGATTTCACCCCACTGATGAAGAATTGGTGAATCACTACTTGTGTAGGAAATGCGCTGGACAAGCAATCGCGGTTCCCATCATCAAAGAGATCGATTTGTACAAGTTTGATCCGTGGCAGCTTCCAGAAATGGGTTTTTACGGCGAGAAAGAATGGTACTTCTTTTCTCCTCGTGACCGGAAATACCCGAACGGTTCGCGGCCGAACCGCGCCGCCGGAAGCGGGTATTGGAAGGCCACCGGAGCCGATAAACCGATCGGAAAACCGAAAGCGCTTGGGATCAAGAAAGCTCTCGTGTTCTACGCGGGAAAAGCCCCCAAAGGAGTGAAGACCAATTGGATCATGCACGAATATCGCCTCGCCAATGTTGACCGATCCGCCGCCAAGAAAAACAACAACTTGAGGCTTGATGACTGGGTGTTGTGTCGAATCTACAACAAGAAAGGGAAGATTGAGAAATACAACACGGCGGCACCGAAAATTAACACTGAGGTGGTTCATAATTTTGATCACGAGAACGAGACCAAGCCGGAGATTCGTAAGCTTGGGATTGAGCCATTGTACATGGACTCGTCGGATTCGGTGCCCAGGTGGCACACGGATTCGAGCTGTTCCGAGCACGTGGTTTCGCCTGATGTCACGTGCGAGCGCGAGGTGCAGAGCGACCCCAAGTGGAATGATCTGGACCTAGACCTAGAAAACGCGTTTGATTTTCAGTTCAATTACTTGGATAATAACTTCCCCGTGGATGACCCTTTCGGCACTCAGCTCTCGCCCTTGCAGGACATGTTCATGAAAAGTCAGCATTTGTGTGCAATTGCATTGCACCTAACTACTACATGTGGGGCTACCCTTGTCGTGTGA 1131 0.4854 MDLASTSATHVSKSTLFLFILSRYKTQPVCPLSYVSSRRAKQSKAEPTTITTKKKKKKKKRLANKKILVKGNALEETRMKGELELPPGFRFHPTDEELVNHYLCRKCAGQAIAVPIIKEIDLYKFDPWQLPEMGFYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKALGIKKALVFYAGKAPKGVKTNWIMHEYRLANVDRSAAKKNNNLRLDDWVLCRIYNKKGKIEKYNTAAPKINTEVVHNFDHENETKPEIRKLGIEPLYMDSSDSVPRWHTDSSCSEHVVSPDVTCEREVQSDPKWNDLDLDLENAFDFQFNYLDNNFPVDDPFGTQLSPLQDMFMKSQHLCAIALHLTTTCGATLVV 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10218g00010 376 FunFam NAC transcription factor 94 240 - -
Mupr10218g00010 376 Pfam No apical meristem (NAM) protein 86 209 IPR003441 GO:0003677|GO:0006355
Mupr10218g00010 376 PANTHER NAC TRANSCRIPTION FACTOR 56 85 280 - -
Mupr10218g00010 376 Gene3D NAC domain 94 241 IPR036093 GO:0003677|GO:0006355
Mupr10218g00010 376 ProSiteProfiles NAC domain profile. 85 236 IPR003441 GO:0003677|GO:0006355
Mupr10218g00010 376 SUPERFAMILY NAC domain 79 236 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10218g00010 Mupr-Chr10218 61313 62735 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10218g00010 79 357 NAC Transcription Factor Family AT1G01720 65.541 2.85e-130 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr10218g00010 NAM 1.4e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10218g00010 - - gmx:100814504 515.383