Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10217g00002 ATGGTTCACTCCACATCTTCTTACTCTAGTTCATTGCTTAACGAAGAAAAAGCCATGAATTTTGAGAGTCGTCCCCCTTTTAAAGCCATAAAAGCAAAACGACAACCTTTGAAAGGCAAAAAAGACCGACACAGCAAAGTGAATGGGAGAGAACGACGTGTTTTGTTGCCACCTTTGTGCGCTGCTCGCATCTTCCAACTCACCCGTGAGCTTGGGTACAAGACTCATGGCGAGACCATTGGGTGGCTTTTACGCCAGGCAGAGCCCTCCATTATTGCTGCCACTAGCACTCAGCTATCATCTTCCATGGTTGCATCTGCATCACTATCATCACCCTCTAAAGACAAAAACATTGTTGCTCTACATGCGGATTCTATTAACAATGACATCAAGTCTGAACAAGAATTTCTACCATTGGATTTTGATTTGTTAGCAACCTTCAATGTGGAGTTTTCTGCTAATGAGATGGCAATGCTCCAATCGTTGATGACGAGAGTCCATGGTATTAGCATAGCTTGTTGA 522 0.4349 MVHSTSSYSSSLLNEEKAMNFESRPPFKAIKAKRQPLKGKKDRHSKVNGRERRVLLPPLCAARIFQLTRELGYKTHGETIGWLLRQAEPSIIAATSTQLSSSMVASASLSSPSKDKNIVALHADSINNDIKSEQEFLPLDFDLLATFNVEFSANEMAMLQSLMTRVHGISIAC 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10217g00002 173 ProSiteProfiles TCP domain profile. 40 94 IPR017887 -
Mupr10217g00002 173 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 32 120 IPR005333 GO:0003700
Mupr10217g00002 173 MobiDBLite consensus disorder prediction 28 47 - -
Mupr10217g00002 173 Pfam TCP family transcription factor 39 118 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10217g00002 Mupr-Chr10217 23723 24341 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10217g00002 1 113 TCP Transcription Factor Family AT5G08330 48.673 3.19e-28 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mupr10217g00002 TCP 1e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10217g00002 - K16221 var:108322003 170.629