Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10202g00002 ATGTCTCACTTTGGACGGTCGGGTCCCCCAGACATTTCCGACACTTACTCTCTTCTCGTTCTCAACATCACCTTCCGTACCACCGCCGACGACCTATTCCCTCTCTTCGATAAGTATGGGAAGGTCGTTGACATCTTCATCCCCAAAGATCGAAGAACCGGTGAGTCGAGGGGTTTTGCGTTTGTGCGCTACAAGTATGCTGATGAGGCTCAAAAGGCCGTTGATAGGCTCGACGGGAGAATGGTTGATGGTCGTGAAATAACGGTCCAGTTTGCGAAATATGGGCCTAATGCTGAGAGGATTCACAAAGGAAGGATTATTGAAACAGCCCAAAGATCAAGGAGGTCAAGGAGCCGCAGTCCCAGGAGAAGGTCTCGTGATGATTACAAAGACCGGGATTATAGGAAGAGAAGTCGAAGCAGAAGCTATGATAGGTATGAACGTGACAGGCATCGTGGGGGTGGGAGAGACAAAGACTATCGTCGCAGAAGCAGGAGCCGTAGTACCAGTCTTGATTACAAGGGTCGTGGGAGGGGACGCTATGATGATGAGCGTCGTAGTAGAAGCCGGAGCAGATCAGTTGATAGCCGGTCCCCTGTGCGACGCAGTCCTAGTCCTCGAAGGAGTCCTTCCCCTCAGAGAAGTCCTTCCCCTCAAAGGAGTGCTTCCCCTAGGAAAAGTCCACGGGGTGAAAGTCCTGCAAATCGTAGCCGTGATGGACGGTCTCCTACCCCTCGCAGTGTCTCACCACGCGGTCGCCCTGATGCTTCGCGAAGCCCTTCCCCTCGAAATTCAAATGGTGATGCGCATGTTGACATTGTCGCTGTTGATGCTGTTTCTATGTCATTGATGATTGGTCGTGAATTTGATGCTGGTTGCAAGAGTATGCTG 891 0.5174 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEAQKAVDRLDGRMVDGREITVQFAKYGPNAERIHKGRIIETAQRSRRSRSRSPRRRSRDDYKDRDYRKRSRSRSYDRYERDRHRGGGRDKDYRRRSRSRSTSLDYKGRGRGRYDDERRSRSRSRSVDSRSPVRRSPSPRRSPSPQRSPSPQRSASPRKSPRGESPANRSRDGRSPTPRSVSPRGRPDASRSPSPRNSNGDAHVDIVAVDAVSMSLMIGREFDAGCKSML 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10202g00002 297 FunFam Serine/arginine-rich splicing factor SC35 4 103 - -
Mupr10202g00002 297 MobiDBLite consensus disorder prediction 102 269 - -
Mupr10202g00002 297 MobiDBLite consensus disorder prediction 214 230 - -
Mupr10202g00002 297 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 16 94 IPR000504 GO:0003723
Mupr10202g00002 297 SMART rrm2_1 17 90 IPR003954 GO:0003676
Mupr10202g00002 297 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 18 88 IPR000504 GO:0003723
Mupr10202g00002 297 MobiDBLite consensus disorder prediction 122 197 - -
Mupr10202g00002 297 CDD RRM_SRSF2_SRSF8 18 90 - -
Mupr10202g00002 297 Gene3D - 4 104 IPR012677 -
Mupr10202g00002 297 SMART rrm1_1 17 90 IPR000504 GO:0003723
Mupr10202g00002 297 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN RZ1A 14 258 - -
Mupr10202g00002 297 SUPERFAMILY RNA-binding domain, RBD 8 100 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10202g00002 Mupr-Chr10202 13739 16990 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10202g00002 13 92 Eukaryotic Initiation Factors Gene Family AT3G11400 35.000 5.50e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10202g00002 K12891 - gmx:100778928 328.561