Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10194g00001 ATGGATAAAATCAGCCATTGTGGTTCTTTTCTTAATGTGGGAATGAGAACACAAGAATTGGCGATAACCTTTTTAGTATTAGGATGCACACTGACGTGGATCTCCACGTGTGGTGCAGTCGTAGGTGGCCACTTAGAGCATGCTCACAATGAGTGCAGTCTTACAAAATATCCCAATCTATGTGCTGAAACCTTGATGGAATTTGGTTCTGGGAATCAAAATGGTGATAACATTGTGGCTCTTGTTAACAAAACCATATTTGAAACCAACTTGCCAAGTTCATATTTTGCTGAATTCAAGACTCAGGATGCTCAACTAGTCCATTCTGTTGTTGCAGACTATTGTGAAGAGTTAATGAGCATGTCAGTGAAAAGGCTGGACCAATCCCTTGCAGAAATGAAATCCCCTCAAAGAAACAACAATGACATCCAAACATGGCTAAGTGCTTCTCTAACTTTCCAACAATCTTGTAAAGACTATGTACATGCACACACCTCAATACTCTCTGCAGATGACCTTATGCAAAGGATGTCCAACAAGATGGACTATCTTTCTCAATTGGGAAGCAACTCATTAGCCCTTGTCAACCAGATGAGCACAAAAACTAGCCACAAAATTGGTGCCAACAAGAATGAACAGGAATTCCCAGAGTGGGTATCATCCAAAGGACGCAAACTTCTTCAGGGAGCCACCATAAAAGCAAATGCAATAGTTGCACAAGATGGTTCAGGAAACTACAGAACAGTTTCTGAGGCCATTGAGGCAGCTTCGGGGACACGGTTTGTGATTTATGTTAAGAAAGGGGTTTATAAGGAGAAGATTCGCACCAACAAGGATGGTATCACATTGATTGGAGATGGAAAATACTCTACTCTTATTGTTGGAGATGCCAGCGTTGCCAAGGGTGCTACCTTACCCGACTCCGCCACATTTATAACACCAACTTTGGTGCATTTCCCAGCAATCACAGGCGATGGCTTCATCGCACGAGATATCGGTTTCCAAAACAACGCGGGCCCACAAGGGCAACAAGCCGTGGCACTAAACATCGCTTCAGACCGCTCCGTCCTCTACAGATGCAGCATAGCAGGGTACCAAGACACCCTCTACGCACACGCCCTACGCCAGTTCTACAGAGAATGCGACATCTACGGAACCGTCGACTTCATCTTCGGCAACGCCGCCGCCGTTTTCCAAAGCTGCAGCTTGGTGCTTCGCCGTCCCAGCGGCGGCGGCTACAACGCCGTTCTCGCAAACGGAAGAACAGACCCCGGACAGAACACGGGCTTTTCTGTTCACAAGTGTAGCATAGCGCCGAGCGCGGATTTTTCTGCTGTGAAACACTCGTATGGTTCGTTTCTGGGGAGACCCTGGAAAGAGTATTCTAGGGCTGTGGTGATGGAGAGTTCCATTGACGATGCTATTGCGGCGAGGGGGTGGATTGAGTGGCCTGGTTACGGAAGCTCTGTGTTGAGGTCTTTGTATTTTGCAGAGTATGGTAATGAAGGATCCGGTGCTGGAACTAACAAGAGGGTGCAGTGGCCTGGTTTTCGTGTTGTTGGGGCTCAAGAGGCTGTTAAGTTCACTGTTGCTAATTTTATCGCTGGAAATTCGTGGATTCCCTCCACGGGAGTTTCTTTCATTTCGGGGCTTAATTAA 1659 0.4671 MDKISHCGSFLNVGMRTQELAITFLVLGCTLTWISTCGAVVGGHLEHAHNECSLTKYPNLCAETLMEFGSGNQNGDNIVALVNKTIFETNLPSSYFAEFKTQDAQLVHSVVADYCEELMSMSVKRLDQSLAEMKSPQRNNNDIQTWLSASLTFQQSCKDYVHAHTSILSADDLMQRMSNKMDYLSQLGSNSLALVNQMSTKTSHKIGANKNEQEFPEWVSSKGRKLLQGATIKANAIVAQDGSGNYRTVSEAIEAASGTRFVIYVKKGVYKEKIRTNKDGITLIGDGKYSTLIVGDASVAKGATLPDSATFITPTLVHFPAITGDGFIARDIGFQNNAGPQGQQAVALNIASDRSVLYRCSIAGYQDTLYAHALRQFYRECDIYGTVDFIFGNAAAVFQSCSLVLRRPSGGGYNAVLANGRTDPGQNTGFSVHKCSIAPSADFSAVKHSYGSFLGRPWKEYSRAVVMESSIDDAIAARGWIEWPGYGSSVLRSLYFAEYGNEGSGAGTNKRVQWPGFRVVGAQEAVKFTVANFIAGNSWIPSTGVSFISGLN 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10194g00001 552 SUPERFAMILY Pectin lyase-like 230 550 IPR011050 -
Mupr10194g00001 552 CDD PMEI-like_3 52 200 - -
Mupr10194g00001 552 NCBIfam pectinesterase inhibitor domain 41 198 IPR006501 GO:0004857
Mupr10194g00001 552 Gene3D Invertase/pectin methylesterase inhibitor family protein 49 200 IPR035513 -
Mupr10194g00001 552 FunFam Pectinesterase 229 551 - -
Mupr10194g00001 552 SMART PMEI_2 43 194 IPR006501 GO:0004857
Mupr10194g00001 552 Gene3D - 229 551 IPR012334 -
Mupr10194g00001 552 FunFam Pectinesterase 45 199 - -
Mupr10194g00001 552 Coils Coil 548 552 - -
Mupr10194g00001 552 Pfam Pectinesterase 235 537 IPR000070 GO:0030599|GO:0042545
Mupr10194g00001 552 Pfam Plant invertase/pectin methylesterase inhibitor 50 194 IPR006501 GO:0004857
Mupr10194g00001 552 ProSitePatterns Pectinesterase signature 2. 383 392 IPR033131 -
Mupr10194g00001 552 PANTHER PECTINESTERASE 36 541 - -
Mupr10194g00001 552 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 50 199 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10194g00001 Mupr-Chr10194 3765 7542 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10194g00001 52 552 Carbohydrate Esterase AT5G53370 42.065 6.18e-127 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10194g00001 K01051 - gmx:100795439 917.916