Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1018g00005 ATGGAGTTTTGGGGCGCTGAGGTTAAAGTTGGGGAATCTGTTAAGGTGGACCCAGTTGAATTCGAGGCATGCATACACCTTTCTCAGGCTGCACTTGGCGAGGCAAAGAAAGACAAAGGAAATGAGCCTGTGGTTGTCTACTTGAAAGTTGGCGAGCAGAAATTTGTTTTGGGAACCCTTTCCAGGGAAAAGATTCCTCAAATATCTCTGGAATTGGTTCTGGAAAAGGAGTTTGAGCTTTCCCACAACTCAAAAAATGCCAGCGTTTATTTCTACAGCGATGAGGATCTTCCAGTGATAAATGCTGATAATGGAAAACCTGAAACAAAAGCTGAAGACTTGAAGGTACCTGAACCCAAAAAACCTGATGCCAAGGTTAGTGCATCAGCAAAACAAGTCAAGGTTGTTGATCCAAAAAAAGACAATGTGGAGGATTCTGATGATGATTCCGATGAAGATGATGATTTTGGAAGTTCTGACGAAGAGATGGGGGATGCCGATAGTGACAGTGACGAAGATGACAGTGACGAAGATGATGACGAGGAGACCCCTCCTAAGAAGGTGGAAGTGGGAAAGAAGAGGACCAATGAATCTGCATCAAAAACTCCAGTTTCCTCCAAGAAAGCTAAAAATTCTACTCCCGAAAAGACTGATGGTAAGAAAACTGGACACACGGCAACTCCTCATCCCAAGAAAGGTGGAAAGACTCCCTCCAGCGATACCAAGGACAAGACTCCCAAGTCTGGTGGACTCTCTTGCAAAAGCTGTAACAAGTCTTTCAACTCTGACAGTGGTCTGCAACAACATAATAAGGCAAAGCATGGTGTTATGTCAGAGAGTGAGTATTCTAAGGAC 855 0.4409 MEFWGAEVKVGESVKVDPVEFEACIHLSQAALGEAKKDKGNEPVVVYLKVGEQKFVLGTLSREKIPQISLELVLEKEFELSHNSKNASVYFYSDEDLPVINADNGKPETKAEDLKVPEPKKPDAKVSASAKQVKVVDPKKDNVEDSDDDSDEDDDFGSSDEEMGDADSDSDEDDSDEDDDEETPPKKVEVGKKRTNESASKTPVSSKKAKNSTPEKTDGKKTGHTATPHPKKGGKTPSSDTKDKTPKSGGLSCKSCNKSFNSDSGLQQHNKAKHGVMSESEYSKD 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1018g00005 285 MobiDBLite consensus disorder prediction 96 285 - -
Mupr1018g00005 285 FunFam Histone deacetylase HDT1 1 95 - -
Mupr1018g00005 285 Pfam Nucleoplasmin-like domain 3 85 IPR041232 -
Mupr1018g00005 285 ProSiteProfiles Zinc finger C2H2 type domain profile. 251 274 IPR013087 -
Mupr1018g00005 285 MobiDBLite consensus disorder prediction 106 127 - -
Mupr1018g00005 285 MobiDBLite consensus disorder prediction 243 273 - -
Mupr1018g00005 285 MobiDBLite consensus disorder prediction 144 183 - -
Mupr1018g00005 285 MobiDBLite consensus disorder prediction 211 225 - -
Mupr1018g00005 285 ProSitePatterns Zinc finger C2H2 type domain signature. 253 274 IPR013087 -
Mupr1018g00005 285 Gene3D Nucleoplasmin core domain 1 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1018g00005 Mupr-Chr1018 32173 36566 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1018g00005 1 274 C2H2 Transcription Factor Family AT5G03740 41.275 2.11e-46 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr1018g00005 NPL 1.7e-12 CL0055
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1018g00005 - - gmx:100795506 382.489