Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10172g00001 ATGGGGAAAAAAGGGAGTTGGTTTTCTGCAGTGAAGAAAGTTTTCAGTCCAGATTCCAAAAAAGATAAGAAAAAACAGAAAAGCCACAGGTCAAAGAAAGCAAGTAGTGACAAGGATGGGGAAGCAGCAGTGACTCTTCCACCAATAGAAGATGTTAAATTAATTGAGGCAGAGAAGGAACAGAGCAAGCATGCTGTTTCTTTGGCTTTTGCCACTGCTGTTGCAGCAGAGGCTGCTGTTGCTGCTGCTCAGGCTGCTGCAGAGGTTGTTCGTCTCACAAGTCTGCCACATTACCATGGAAAGACTAAGGAAGAAATTGCAACCATCAAGATTCAGACCGCATTTCGTGGATACATGGCAAGAAGGGCATTGCGTGCCTTGAGAGGTTTGGTTCGGTTGAAAACGTTAGTACAAGGGCAATCTGTTAAACGGCAAGCTACTAGCACCTTACGAAGCATGCAAACTCTAGCAAGATTACAGTCTCAGATTCGTGAAAGGAGAATTAGAATGTCTGAAGAGAACCAAGCTCTTCAGCGCCAACTACAGCAGAAACACGAAAAAGAACTGGAGAAGTTGTGTGCTGCTGTTGGAGAAGAGTGGGATGATAGCTTGCAGTCAAAGGAGCAAATTGAAGCAAAATTGTTGCACAAGCAAGAAGCTGCTTTGAGAAGAGAGAGAGCTTTGGCCTATTCATTCTCACATCAGCAAACATGGAAGGGGTCTTCAAAATCATTAAATCCGACATTTATGGATCCAAACAATCCCCAATGGGGGTGGAGTTGGCTAGAGAGATGGATGACTACTCGGCCATGGGATGGCCATAGCACTGTGGATCACAATGATCATGCATCAGTGAAGAGTGCAGCAAGGCGTGCCATGTCTGTAGGAGAAATCAGCAAATTGTATTCTCTCCAAGACCAGAATCACAATACAAGACCTTCCCCTTTTGGCCAAAAAGCAAGAAGACCTTCCTCTCACATTTCCCCTTCAAAGGCACCATCTGCTAGTGGCAAGGCAAGGCCATCAAGCTCAAAGGGTAGCAGTGTCTGGGGTGGAGATGATGAGTCAAGAAGCATGCTTAGTGTTCAGTCCGAGCGCTATCGCCGGCACAGCATTGCAGGGTCTTCAGTGAGAGATGATGAGAGCCTTGCAAGCTCACCTGCCATTCCTAGTTACATGGCACCAACAAGCTCAGCAAAGGCCAGGTTCAAAATCCATAGGCCATCACCTGAAAAAGGAGGTGCTGCTGTTTCTGCTAAGAAGCGCCTTTTTTTCTCTCCTTCTCCGGCCCCTTCAAGAAGGTATTCTGATCCTCCTAAGGTGGAAATGCTTTCCAATAAGGATTATGCTCCTGCCACAGTTAGCAATGGCAGGGGAAGCTTCAAGGTATATAGAGACGTTATTCGTGGGGGAGCCTTATTGAAGGGTGGGCCAATGTGA 1440 0.4653 MGKKGSWFSAVKKVFSPDSKKDKKKQKSHRSKKASSDKDGEAAVTLPPIEDVKLIEAEKEQSKHAVSLAFATAVAAEAAVAAAQAAAEVVRLTSLPHYHGKTKEEIATIKIQTAFRGYMARRALRALRGLVRLKTLVQGQSVKRQATSTLRSMQTLARLQSQIRERRIRMSEENQALQRQLQQKHEKELEKLCAAVGEEWDDSLQSKEQIEAKLLHKQEAALRRERALAYSFSHQQTWKGSSKSLNPTFMDPNNPQWGWSWLERWMTTRPWDGHSTVDHNDHASVKSAARRAMSVGEISKLYSLQDQNHNTRPSPFGQKARRPSSHISPSKAPSASGKARPSSSKGSSVWGGDDESRSMLSVQSERYRRHSIAGSSVRDDESLASSPAIPSYMAPTSSAKARFKIHRPSPEKGGAAVSAKKRLFFSPSPAPSRRYSDPPKVEMLSNKDYAPATVSNGRGSFKVYRDVIRGGALLKGGPM 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10172g00001 479 ProSiteProfiles IQ motif profile. 104 132 IPR000048 GO:0005515
Mupr10172g00001 479 SMART iq_5 103 125 IPR000048 GO:0005515
Mupr10172g00001 479 MobiDBLite consensus disorder prediction 302 399 - -
Mupr10172g00001 479 MobiDBLite consensus disorder prediction 302 351 - -
Mupr10172g00001 479 Pfam IQ calmodulin-binding motif 107 125 IPR000048 GO:0005515
Mupr10172g00001 479 PANTHER IQ-DOMAIN 5-RELATED 1 438 - -
Mupr10172g00001 479 MobiDBLite consensus disorder prediction 17 44 - -
Mupr10172g00001 479 Coils Coil 156 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10172g00001 Mupr-Chr10172 2305 8567 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10172g00001 1 460 IQD Protein Family AT5G03040 50.207 1.12e-133 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10172g00001 - - gmx:100809448 670.233