Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10169g00001 ATGGGAAAGAAGAAGCCGACGGCGAGGGACGACGAGAATCCGTCGCAGCAAGGCGGCGGGGGGAAATCGAAGAAGAAGGCGGTGGTCATCGACGACGACGAGTACGCCATCGCAGCGGAGCTCTCCGAGGAGACGGCGCCGGCACCTGCACCTGCACCAGAGAAACCCGCCGGAAAGAAGAGAGGTAAAAAAGGTAATGCTAAAGCTAAGAATAATGATGATGATGTTGATGATGATGAGGATGTGCCTGAAGTTGTGTTTGCTGGGAAGAAGAAGGGGAAAAATAAGAAAGGTGGTGGGAGCAGTGCATTCACTGCATCTAGCTTTGGTTTGCTTGGTGATGAGGAAGACGACGATGAAGAAAAATCTGGGTTAACCGGTGAGGCTGATGGTGAGGAGGAGGATGAACCTGTGGTTAGTTTTACGGGTAAGAAGAAGCCATCCAAGAAAGGTGGTGCTAGTTTGTTCAGTGCATCTGCTTTTGATGCTATTGATGATGGTGATGGTGGCGAGGAGGAGGATGAGCCAGTGGTTAGTTTTTCTGGCAAGAAGAAGCCTTCCAAGGGTTCGAAGAAAGGCAGTGGCAGTTTGTTTGCTGCCTCGGCTTTTGATGCTATTGATGATGAGGTGGTGGATGATGGAGGGGATAAGGATGATGATGTTGATGCTGATGAGCCCGTTATTGCTTTCACGGGGAAGAAGAAGTCTTCGAAAGGAACCAAGAAGGGCGGTGCTGTGTTTTCTGCTTCTGTTCTTGGTGAGATTGATGATGGAGACGAGAGTAAGGATGGTGGGGATGATGACGACGACGACATTGGACCGATCACTTTCTCTGGTAAGAAAAAGAAGTCTTCCAAGAAGGCTGGTAATTCTGTGAGCAAAGGTGTTTCTGTTGAGGATGACGTTCCTGTGCCTGAGTCTGGTAAAGGTGGTGATGGCAAGGATGAGGATGATGTTTCTTTAGTTGCGTTTTCAGGTAAAAAGAAGTCTTCTAAAAAGAAAGGAAGTAGTACTGCTGCCAAAGTTGGTGACGAACTTGGGTTTGGGAGTGAAAATGTGGATGTAGTTGAGCCCGAGCAACCCAGTGCTGGAATTAGTAGTACTGATGCTGGCAACAGCAATGTGAATAAGATTGAAGGGGCTGCTGAAACTTCCAAAAATAAGAAGAAGAATAAGAAAAAGAGTGGAAGAACTGCTCAAGAGGAGGAAGATTTGGACAAACTTCTTGCAGAGCTTGGCGAGGCCCCTCCTGTACCAAAACCCACAGCTTCTCCACCACAGGATGATAAAGTTCAGCCTACTCCCGAAGCAGGTTCTGTTGCTGATGCTTCAGGGGAAAAGGAGGGTGATGAGGAGACTGTAGAGTCAGCTGCTGCAAAGAAGAAGAAGAAGAAAAAGGAAAAGGAAAAGGAGAAGAAGGCAGCAGCTGCTGCCGCAGCAGCAGCAGGAACTGCACCGGCAATTGAAACAGCAGAAATTAAAGTTGACATAATTGAACCAAAGAAGAATGAGTCAAAGATTAAAGCAGCTGATAAGAAAGTGCCAAAGCATGTTAGGGAGATGCAAGAGGCACTAGCTCGAAGAAAAGAGGCTGAAGAAAGGAAGAAAAGAGAAGAGGAGGAGAAGTTGAGGAAGGAGGAAGAGGAGCGACGAAGGCAAGAGGAACTTGAGAGACAGGCAGAAGAGGCTAGACGTAGAAAGAAGGAAAGAGAGAAGGAGAAACTCCAGAAAAAAAAGCAAGAAGGTAAACTGTTAACTGGTAAGCAGAAGGAAGAAGCTCGCCGTTTGGAGGCAATGAGGAGGCAGATTCTCAATAACACAGGGGGTGTGACTCTCCCTTCTGGGGATGCTGGTGCTGCAGCCAAAACCAAAAAACCCATATATCAGACAAAGAAGTTAAAACCAAATCATCGTAATCAGAATGGTGCTGCTTCTCAGACAGCTGAAAGTGTTGAAGCAAAGGAGACTACCACTGATATTGTTTCAGAGGAACCAGAAAAGATTGAAGAAGTGGAGTCAATGCAGGTGGATGACAAAGTTGAACTTCCTGTAGCTGTTGAAGAGGATGGAGCGGAAGATGATGAAGAGGATGAATGGGATGCAAAAAGCTGGGATGATGTTAATCTGAATGCCAAAGGCGCATTTGCTGATGAAGAGGCTGACACAGAGCCTGAACCTATTGTCAAAATGGAGATTAAAAATGCAGCACCTACTCAGAATGCTGGAGCTACTAGTAAAACTGTTTCTAAGCCTGTGGCTGAAGAAATTGAAAATGGGGAGCAGGCTAATGCTGTGGTTGTGGACAAAAATAAAAAGCATGATCATGACTTGAATAGGGAACCTAGAAAGTCTGCTGTGCCTCCTAAGCCTAGTGATGAGAACCTCCGCTCCCCAATTTGCTGTATCATGGGGCATGTGGATACTGGCAAAACCAAACTGCTGGATTGTATTCGAGGTACTAATGTTCAGGAGGGTGAGGCTGGTGGTATCACACAACAGATTGGTGCAACATACTTTCCTGCTGAGAACATACGTGAAAGAACGAAGGAACTGAAAGCTGATGCTAAGCTGAAAGTTCCTGGTCTACTGGTTATTGATACCCCAGGACATGAGTCATTTACTAACTTGAGGTCTCGGGGTTCAGGTCTATGTGATATTGCAATTTTGGTTGTTGACATTATGCATGGATTGGAGCAACAAACAATAGAATCACTAAATCTATTAAAAATGAGGAATACAGAATTCATTGTTGCCTTGAATAAGGTTGACAGGCTTTATGGGTGGAAGACATGTCGCAATTCTCCAATTGTTAAAGCAATGAAGCAGCAAACTAAGGATGTTCAAAATGAGTTTAATATGAGGCTCACGCAGATTATTACTCAATTCAAAGAACAGGGACTGAATACTGAGTTATATTATAAAAACAAAGAAATGGGAGAAACATTCAGCATTGTGCCTACAAGTGCAATAAGTGGTGAAGGAATTCCCGATTTGTTATTGCTATTGATTCAATGGACCCAAAAAACAATGGTTGAGAAGCTTACATACAGTGACGAAGTGCAGTGTACTGTTTTAGAGGTGAAGGTAGTTGAAGGCCATGGAACTACTATTGATGTTGTTTTAGTTAATGGTGTTCTTCATGAAGGAGAACAAATAGGACCAATTGTTACCACAATTCGAGCTTTATTGACACCTCATCCAATGAAGGAACTTCGTGTGAAGGGAACATATCTTCATCACAAAGAAATCAAAGCTGCAATGGGTATAAAAATCACTGCCCAGGGGCTTGAACATGCCATTGCTGGTACTGGTTTATATGTGGTGAAGCCTGATGATGATTTGGAAGATGTTAAAGAAGCAGCCATGGAAGATATGAAGTCAGTCATGAGCAGAATTGACAGGACTGGTGAGGGTGTTTGTGTACAGGCATCTACCCTTGGCTCCTTGGAAGCATTACTGGAGTTTTTGAAAACTCCAGAAGTGAATATCCCTGTTAGTGGTATAAGCATTGGCCCTGTACATAAAAAGGATGTAATGAAAGCCAGTGTGATGCTTGAAAAGAAGCGGGAGTATTCAGCTATATTGGCATTTGATGTCAAAGTTACTCCTGAGGCTAGGGAACTGGCAGATGAATTGGGCGTGAAAATATTTATTGCTGATATCATTTATCATCTGTTTGATCAATTTAAAGCTTATATTGACAACATTAAGGAGGAGAAAAAGAAAGAAGCTGCTGATGAGGCAGTCTTCCCATGTGTTCTGAAAATCTTACCAAATTGCATTTTCAACAAGAAAGACCCTATTGTTTTGGGAGTTGATATCCTTGAAGGCATTGCAAAGATTGGGACTCCAATTTGCATTCCTTCCAGAGAGTTCATTGATATTGGTCGACTTGCGTCCATTGAGAATAACCATAAACCTGTTGATTATGCAAAGAAGGGGCAGAAAGTAGCCATCAAGATTGTTGGCAGCAATTCTGAAGAGCAACAGAAAATGTTTGGGAGGCATTTTGAGATTGATGATGAGCTTGTAAGCCATATTTCCCGGAGATCTATTGATGTACTCAAAACTAATTATCGGGTTGCTTGTGAAATTGAAGAATCTTTTCAAGATACAATGAGACTTGATGTCTGGGCACTCGAGTATTCATTTCAGGAAAACAAGGTTTTAGTGAAATGTTTGGTTTTATGCAACACTTTGAAGGATTTGTTGAGGAAAAGATTGGATCCACCATGGAGACCAGTAAAGCGGTATCATGGAGAGGCAAAAGTAACTTATATGGACGAAACTCCAAATGCTTTTAAGGTGGGAAGCTCAGGTGGAAAGGGTGAGGAAAGGAAAACTTGCAAGAGCAAAATTTTGTGA 4365 0.4339 MGKKKPTARDDENPSQQGGGGKSKKKAVVIDDDEYAIAAELSEETAPAPAPAPEKPAGKKRGKKGNAKAKNNDDDVDDDEDVPEVVFAGKKKGKNKKGGGSSAFTASSFGLLGDEEDDDEEKSGLTGEADGEEEDEPVVSFTGKKKPSKKGGASLFSASAFDAIDDGDGGEEEDEPVVSFSGKKKPSKGSKKGSGSLFAASAFDAIDDEVVDDGGDKDDDVDADEPVIAFTGKKKSSKGTKKGGAVFSASVLGEIDDGDESKDGGDDDDDDIGPITFSGKKKKSSKKAGNSVSKGVSVEDDVPVPESGKGGDGKDEDDVSLVAFSGKKKSSKKKGSSTAAKVGDELGFGSENVDVVEPEQPSAGISSTDAGNSNVNKIEGAAETSKNKKKNKKKSGRTAQEEEDLDKLLAELGEAPPVPKPTASPPQDDKVQPTPEAGSVADASGEKEGDEETVESAAAKKKKKKKEKEKEKKAAAAAAAAAGTAPAIETAEIKVDIIEPKKNESKIKAADKKVPKHVREMQEALARRKEAEERKKREEEEKLRKEEEERRRQEELERQAEEARRRKKEREKEKLQKKKQEGKLLTGKQKEEARRLEAMRRQILNNTGGVTLPSGDAGAAAKTKKPIYQTKKLKPNHRNQNGAASQTAESVEAKETTTDIVSEEPEKIEEVESMQVDDKVELPVAVEEDGAEDDEEDEWDAKSWDDVNLNAKGAFADEEADTEPEPIVKMEIKNAAPTQNAGATSKTVSKPVAEEIENGEQANAVVVDKNKKHDHDLNREPRKSAVPPKPSDENLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTKELKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEQQTIESLNLLKMRNTEFIVALNKVDRLYGWKTCRNSPIVKAMKQQTKDVQNEFNMRLTQIITQFKEQGLNTELYYKNKEMGETFSIVPTSAISGEGIPDLLLLLIQWTQKTMVEKLTYSDEVQCTVLEVKVVEGHGTTIDVVLVNGVLHEGEQIGPIVTTIRALLTPHPMKELRVKGTYLHHKEIKAAMGIKITAQGLEHAIAGTGLYVVKPDDDLEDVKEAAMEDMKSVMSRIDRTGEGVCVQASTLGSLEALLEFLKTPEVNIPVSGISIGPVHKKDVMKASVMLEKKREYSAILAFDVKVTPEARELADELGVKIFIADIIYHLFDQFKAYIDNIKEEKKKEAADEAVFPCVLKILPNCIFNKKDPIVLGVDILEGIAKIGTPICIPSREFIDIGRLASIENNHKPVDYAKKGQKVAIKIVGSNSEEQQKMFGRHFEIDDELVSHISRRSIDVLKTNYRVACEIEESFQDTMRLDVWALEYSFQENKVLVKCLVLCNTLKDLLRKRLDPPWRPVKRYHGEAKVTYMDETPNAFKVGSSGGKGEERKTCKSKIL 1454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10169g00001 1454 Gene3D - 1133 1237 IPR036925 -
Mupr10169g00001 1454 MobiDBLite consensus disorder prediction 443 462 - -
Mupr10169g00001 1454 MobiDBLite consensus disorder prediction 633 655 - -
Mupr10169g00001 1454 Coils Coil 451 479 - -
Mupr10169g00001 1454 CDD IF2_eIF5B 798 1008 - -
Mupr10169g00001 1454 Gene3D - 789 1017 IPR027417 -
Mupr10169g00001 1454 MobiDBLite consensus disorder prediction 209 223 - -
Mupr10169g00001 1454 MobiDBLite consensus disorder prediction 395 410 - -
Mupr10169g00001 1454 MobiDBLite consensus disorder prediction 112 136 - -
Mupr10169g00001 1454 CDD aeIF5B_II 1019 1123 - -
Mupr10169g00001 1454 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 795 1080 IPR027417 -
Mupr10169g00001 1454 Gene3D Translation factors 1244 1385 - -
Mupr10169g00001 1454 Gene3D Translation factors 1018 1132 - -
Mupr10169g00001 1454 MobiDBLite consensus disorder prediction 305 323 - -
Mupr10169g00001 1454 SUPERFAMILY Translation proteins 1248 1361 IPR009000 -
Mupr10169g00001 1454 MobiDBLite consensus disorder prediction 1 195 - -
Mupr10169g00001 1454 FunFam Eukaryotic translation initiation factor 5B 1131 1237 - -
Mupr10169g00001 1454 MobiDBLite consensus disorder prediction 361 381 - -
Mupr10169g00001 1454 Coils Coil 514 585 - -
Mupr10169g00001 1454 CDD IF2_aeIF5B_IV 1252 1347 - -
Mupr10169g00001 1454 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 342 1365 IPR015760 -
Mupr10169g00001 1454 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 1114 1243 IPR036925 -
Mupr10169g00001 1454 MobiDBLite consensus disorder prediction 209 683 - -
Mupr10169g00001 1454 FunFam Eukaryotic translation initiation factor 5B 1244 1375 - -
Mupr10169g00001 1454 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 795 1011 IPR000795 GO:0003924|GO:0005525
Mupr10169g00001 1454 PRINTS GTP-binding elongation factor signature 879 890 IPR000795 GO:0003924|GO:0005525
Mupr10169g00001 1454 PRINTS GTP-binding elongation factor signature 863 873 IPR000795 GO:0003924|GO:0005525
Mupr10169g00001 1454 PRINTS GTP-binding elongation factor signature 915 924 IPR000795 GO:0003924|GO:0005525
Mupr10169g00001 1454 PRINTS GTP-binding elongation factor signature 799 812 IPR000795 GO:0003924|GO:0005525
Mupr10169g00001 1454 MobiDBLite consensus disorder prediction 656 683 - -
Mupr10169g00001 1454 MobiDBLite consensus disorder prediction 766 789 - -
Mupr10169g00001 1454 MobiDBLite consensus disorder prediction 494 599 - -
Mupr10169g00001 1454 NCBIfam small GTP-binding protein domain 800 926 IPR005225 GO:0005525
Mupr10169g00001 1454 Pfam Translation-initiation factor 2 1116 1230 IPR023115 -
Mupr10169g00001 1454 FunFam eukaryotic translation initiation factor 5B 1018 1131 - -
Mupr10169g00001 1454 FunFam Eukaryotic translation initiation factor 5B 789 1017 - -
Mupr10169g00001 1454 Pfam Elongation factor Tu GTP binding domain 799 1007 IPR000795 GO:0003924|GO:0005525
Mupr10169g00001 1454 MobiDBLite consensus disorder prediction 756 792 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10169g00001 Mupr-Chr10169 3725 13699 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10169g00001 215 1367 Eukaryotic Initiation Factors Gene Family AT1G76810 63.721 0.0 1152