Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10168g00004 ATGCAGAAGCATGGCTTTGCATCAAAACGCAACGTGTTGCCGTATCAAACCCCGAGACTGAGGGACCACTACGTTCTGGGAAAGAAGCTGGGGCAAGGTCAATTCGGAACAACGTACCTGAGCACCCACAAGGTGACGGGGAAGCTTTACGCATGCAAATCGATCCCCAAGAGGAAGCTTCTGTGCCAGGAGGATTATGACGATGTTTGGAGGGAGATTCAGATCATGCACCATCTGTCGGAGCATCCCAATGTTGTTCAGATACAGGGCACGTACGAGGATTCCGTGTTCGTACATCTTGTCATGGAGCTCTGTGCCGGGGGCGAGCTTTTCGATAGGATAATTCAGAAGGGTCATTACAGTGAGAAAGAGGCTGCAAAGTTGATAAAGACCATTGTTGGGGTGGTGGAGGCCTGTCACTCTCTTGGGGTCATGCATAGAGATCTCAAGCCTGAGAATTTCTTGTTTGATACCCCTGGCGAAGATGCTAAGATGAAGGCCACCGATTTTGGCCTCTCCGTCTTCTACAAGCCAGGACAAGCCTTTCATGATGTAGTGGGAAGTCCCTACTATGTTGCTCCTGAGGTTTTGTGCAAGCAATATGGACCAGAAGTGGACGTATGGAGTGCTGGTGTTATCCTATACATCTTACTGAGTGGAGTACCACCTTTCTGGGCTGAAACCGAAGCAGGAATTTTCAGACAGATTTTAAATGGAGAGCTTGATTTTGTTTCTGAACCGTGGCCAAGTATTTCAGAAAGTGCTAAAGAATTGGTAAAGCAGATGTTGGATAGGGACCCTAAGAGAAGAATTTCTGCTCATGAAGTTTTATGTAACCCTTGGATCGTTGATGATAAGGTTGCACCTGACAAACCTCTAGACTCTGCTGTTTTGACACGCCTAAAGCATTTCTCAGCAATGAATAAACTTAAGAAGATGGCATTACGGGTCATAGCAGAAAGACTTTCAGAGGAAGAGATAGGTGGATTAAAAGAGTTATTTAAAATGATTGACACAGACAATAGTGGGACAATAACTTTTGAGGAACTCAAGGAGGGTTTGAAAAGTGTGGGTTCTGATCTCATGGAATCTGAAATTAAATCCCTTATGGAAGCGGCTGATATAGACAACAATGGAACAATAGACTATGGTGAATTTCTTGCTGCTACACTGCACTTGAATAAGATGGAAAGAGAGGAGAATTTGGTTGCTGCTTTTGCGTATTTTGATAAAGATGGTAGTGGATACATCACCATTGATGAGCTTCAACAGGCTAGTAAAGACTTTGGCCTAGGTGATGTGGAACTGGATGATATGATCAAAGAGATTGATCAAGACAATGATGGGAGAATTGATTATGGGGAGTTTGCAGCAATGATGAAAAAGGGTGATCCAGATATGGGTAGAAGCAGAACCATGAAAGGCAATTTGAACTTCAATATTGCAGATGCATTTGGAGTTGGTTCACGCCAATACATTGTTCATCCTGGGCGATGGATTGTTGTTCAGAGGTTGAAAGGTGCTAATGTTAATGATAAGATTGCCTTACATAAGGTGTTACTGGTTGGCACTGATACAACTTGCTACATTGGGAAACCAATAGTAACAAATGCTGTGGTATATGCAACAGTGGAAGAGCAGGGTTTAGACCCCAAAGTAATTGTCTTCAAATATAAAAAGAAGAAACACTATCGCAGAACCATTGGGCACAGACAGCCAAATACACGTTTACGGATAAATAGCATTATGGGCTATGAGAGCTACCCAAAAGTTACTATGGACGATTTCAAATCTGACGATTCCAAATCAGACGATTCCGAATCATGA 1827 0.4319 MQKHGFASKRNVLPYQTPRLRDHYVLGKKLGQGQFGTTYLSTHKVTGKLYACKSIPKRKLLCQEDYDDVWREIQIMHHLSEHPNVVQIQGTYEDSVFVHLVMELCAGGELFDRIIQKGHYSEKEAAKLIKTIVGVVEACHSLGVMHRDLKPENFLFDTPGEDAKMKATDFGLSVFYKPGQAFHDVVGSPYYVAPEVLCKQYGPEVDVWSAGVILYILLSGVPPFWAETEAGIFRQILNGELDFVSEPWPSISESAKELVKQMLDRDPKRRISAHEVLCNPWIVDDKVAPDKPLDSAVLTRLKHFSAMNKLKKMALRVIAERLSEEEIGGLKELFKMIDTDNSGTITFEELKEGLKSVGSDLMESEIKSLMEAADIDNNGTIDYGEFLAATLHLNKMEREENLVAAFAYFDKDGSGYITIDELQQASKDFGLGDVELDDMIKEIDQDNDGRIDYGEFAAMMKKGDPDMGRSRTMKGNLNFNIADAFGVGSRQYIVHPGRWIVVQRLKGANVNDKIALHKVLLVGTDTTCYIGKPIVTNAVVYATVEEQGLDPKVIVFKYKKKKHYRRTIGHRQPNTRLRINSIMGYESYPKVTMDDFKSDDSKSDDSES 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10168g00004 608 CDD STKc_CAMK 23 281 - -
Mupr10168g00004 608 ProSitePatterns EF-hand calcium-binding domain. 338 350 IPR018247 -
Mupr10168g00004 608 FunFam Calcium-dependent protein kinase SK5 192 287 - -
Mupr10168g00004 608 Pfam Protein kinase domain 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr10168g00004 608 CDD EFh 330 389 IPR002048 GO:0005509
Mupr10168g00004 608 Gene3D Phosphorylase Kinase; domain 1 25 109 - -
Mupr10168g00004 608 NCBIfam 50S ribosomal protein L21 486 582 IPR001787 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Mupr10168g00004 608 Hamap 50S ribosomal protein L21 [rplU]. 481 584 IPR001787 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Mupr10168g00004 608 ProSiteProfiles EF-hand calcium-binding domain profile. 435 466 IPR002048 GO:0005509
Mupr10168g00004 608 SMART serkin_6 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr10168g00004 608 ProSiteProfiles EF-hand calcium-binding domain profile. 361 396 IPR002048 GO:0005509
Mupr10168g00004 608 Gene3D Transferase(Phosphotransferase) domain 1 110 289 - -
Mupr10168g00004 608 FunFam CDPK-related kinase 3 16 184 - -
Mupr10168g00004 608 ProSiteProfiles EF-hand calcium-binding domain profile. 325 360 IPR002048 GO:0005509
Mupr10168g00004 608 Pfam EF-hand domain pair 400 461 IPR002048 GO:0005509
Mupr10168g00004 608 Pfam EF-hand domain pair 330 390 IPR002048 GO:0005509
Mupr10168g00004 608 ProSitePatterns Protein kinases ATP-binding region signature. 30 53 IPR017441 GO:0005524
Mupr10168g00004 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Mupr10168g00004 608 ProSiteProfiles Protein kinase domain profile. 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr10168g00004 608 Pfam Ribosomal prokaryotic L21 protein 487 582 IPR028909 GO:0005840
Mupr10168g00004 608 ProSitePatterns EF-hand calcium-binding domain. 374 386 IPR018247 -
Mupr10168g00004 608 FunFam Calcium-dependent protein kinase 1 290 464 - -
Mupr10168g00004 608 SUPERFAMILY L21p-like 487 582 IPR036164 -
Mupr10168g00004 608 CDD EFh 402 461 IPR002048 GO:0005509
Mupr10168g00004 608 SUPERFAMILY Protein kinase-like (PK-like) 20 292 IPR011009 -
Mupr10168g00004 608 FunFam Calcium-dependent protein kinase 1 26 109 - -
Mupr10168g00004 608 ProSitePatterns EF-hand calcium-binding domain. 444 456 IPR018247 -
Mupr10168g00004 608 Gene3D - 290 464 - -
Mupr10168g00004 608 ProSitePatterns EF-hand calcium-binding domain. 410 422 IPR018247 -
Mupr10168g00004 608 SUPERFAMILY EF-hand 321 461 IPR011992 -
Mupr10168g00004 608 ProSiteProfiles EF-hand calcium-binding domain profile. 397 432 IPR002048 GO:0005509
Mupr10168g00004 608 PANTHER SERINE/THREONINE-PROTEIN KINASE 19 456 - -
Mupr10168g00004 608 ProSitePatterns Ribosomal protein L21 signature. 553 575 IPR018258 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Mupr10168g00004 608 SMART efh_1 401 429 IPR002048 GO:0005509
Mupr10168g00004 608 SMART efh_1 365 393 IPR002048 GO:0005509
Mupr10168g00004 608 SMART efh_1 329 357 IPR002048 GO:0005509
Mupr10168g00004 608 SMART efh_1 435 463 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10168g00004 Mupr-Chr10168 19346 28675 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10168g00004 11 487 EF-hand Containing Proteins AT1G35670 83.019 0.0 837
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mupr10168g00004 Pkinase 1.4e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10168g00004 K13412 - gmx:547887 950.658