Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10168g00001 ATGAATTATGGTGGAGGTGTTGCACAAGGCAGAGAATGCAAAATGAAAACCACAAGCGCGCTGAACAATAATCGGATAAACTTTGGTGGAGGTCATATGGAGTCTGACATAGCTTCCACATGTCACAAAAGCAATGGTGCCAAATGTGGAGGGACGGCGCACCAAACAGACAATTGTGAAGAATGTGACATGCATAATGCATGTCAAGAGAAGTCTGAAACCTACTTGAATCCATTTGATAATATTCTTTTGGAGGGAAGTTGGAAAATTCTACAGCTTCTGATGAGTTATTATGATCATGTGATGAGTGGAATCATGGTAACTAGCTACATGGTGTGCCTGGTGGTCGTGAATCGTGATGACGACAGGGCAGGTCTTTCTCCACCACCAGCAGGCGTTGAGAGTGCACTGCACTCAAAGAAATGTGACATGCTTGAGAGATCATCAATTGACATGGAATCATGTGTGCCTCCAGGATTTAGATTTCATCCAACAGAAGAGGAGCTTGTGGGGTATTACCTCAAGAGGAAGATAAACTCGCTAAAAATCGATCTAGATGTTATTGTTGAGATTGATCTCTACAAAATGGAACCATGGGACATACAAGATAGGTGCAAGCTAGGATATGAGCAACAGAATGAGTGGTACTTTTTCAGCCATAAAGATAAGAAGTATCCTACAGGAACAAGAACTAACAGGGCCACTGCTGCTGGATTCTGGAAAGCAACAGGAAGGGACAAGGCTGTGATGTCCAAAAATAGAATCATAGGAATGAGGAAGACCTTGGTGTTCTACAAGGGACGTGCCCCTAATGGAAGGAAAACAGACTGGATTATGCATGAATATAGGCATCAAACCTCTGAACATGGCCCTCCACAGGCAAGTTTATTTTATTTCTTCTCTCTTCGATCATATATACATATATCAACCATTGTCAATTGA 942 0.4214 MNYGGGVAQGRECKMKTTSALNNNRINFGGGHMESDIASTCHKSNGAKCGGTAHQTDNCEECDMHNACQEKSETYLNPFDNILLEGSWKILQLLMSYYDHVMSGIMVTSYMVCLVVVNRDDDRAGLSPPPAGVESALHSKKCDMLERSSIDMESCVPPGFRFHPTEEELVGYYLKRKINSLKIDLDVIVEIDLYKMEPWDIQDRCKLGYEQQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVMSKNRIIGMRKTLVFYKGRAPNGRKTDWIMHEYRHQTSEHGPPQASLFYFFSLRSYIHISTIVN 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10168g00001 313 SUPERFAMILY NAC domain 150 290 IPR036093 GO:0003677|GO:0006355
Mupr10168g00001 313 FunFam Nac domain-containing protein 86 165 306 - -
Mupr10168g00001 313 ProSiteProfiles NAC domain profile. 156 302 IPR003441 GO:0003677|GO:0006355
Mupr10168g00001 313 Pfam No apical meristem (NAM) protein 157 283 IPR003441 GO:0003677|GO:0006355
Mupr10168g00001 313 Gene3D NAC domain 165 303 IPR036093 GO:0003677|GO:0006355
Mupr10168g00001 313 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 153 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10168g00001 Mupr-Chr10168 2941 5667 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10168g00001 152 293 NAC Transcription Factor Family AT1G71930 85.915 2.88e-90 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr10168g00001 NAM 6.9e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10168g00001 - - var:108325420 309.301