Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10163g00007 ATGGAGACACTACAAACAGAAAGCACTCCGGAGGAACACAGTCTTATTATTACTGATGTTCGCTTCAGACCAAATTCATCTCAGCTGGCAACATCTTCATTTGACACAACTGTGCGGCTGTGGGATGCTGCAGATCCAAGCTTTTCTTTACAGGCATATAATGGTCATACATCACATGTGGTATCCCTTGATTTCCACCCAAAGAAAAATGACCTTTTCTGTTCTTGTGACGATAACAATGAGATTCGCTTCTGGAATATTAGTCAATATTCTTGCACTCGTGTTTTTAAGGGAGGATCTACACAGGTGAGGTTTCAGCCAAGGCTTGGTCATCTTCTGGCTGCAGCAAGTGGCAGTGTTGTGTCTCTCTTTGATGTTGAGACTGACAGGCAGATGCACACATTACAGGGACATTCTGCAGAGGTACACTGTGTCTGTTGGGATACAAATGGAGATTACTTGGCATCTGTGAGTCAAGAATCTGTCAAAGTGTGGTCACTTGCCTCTGGGGAGTGCATTCATGAACTTAATTCCAGTGGAAACATGTTTCATTCTTGTGTTTTTCACCCAAGCTACTCCACTCTCTTGGTTATTGGAGGATACCAGCTGTGCATATCAAGCTATGTTGTATGTTATACTATAGAAATATTTGCTTTATTGATTCAAATAGTAACAGCTGAGTATTACAACTTAAATAGGAAATCAGAGGGAGACAAATCCCTAAATCATAGGGAATTGGAATCCCATAAAATAAGGAAGAAAAAAGGA 768 0.4089 METLQTESTPEEHSLIITDVRFRPNSSQLATSSFDTTVRLWDAADPSFSLQAYNGHTSHVVSLDFHPKKNDLFCSCDDNNEIRFWNISQYSCTRVFKGGSTQVRFQPRLGHLLAAASGSVVSLFDVETDRQMHTLQGHSAEVHCVCWDTNGDYLASVSQESVKVWSLASGECIHELNSSGNMFHSCVFHPSYSTLLVIGGYQLCISSYVVCYTIEIFALLIQIVTAEYYNLNRKSEGDKSLNHRELESHKIRKKKG 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10163g00007 256 Gene3D - 105 208 IPR015943 GO:0005515
Mupr10163g00007 256 Gene3D - 1 104 IPR015943 GO:0005515
Mupr10163g00007 256 PANTHER TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 1 203 IPR044716 GO:0003714
Mupr10163g00007 256 SUPERFAMILY WD40 repeat-like 3 202 IPR036322 GO:0005515
Mupr10163g00007 256 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 53 88 - -
Mupr10163g00007 256 SMART WD40_4 128 166 IPR001680 GO:0005515
Mupr10163g00007 256 SMART WD40_4 169 209 IPR001680 GO:0005515
Mupr10163g00007 256 SMART WD40_4 89 125 IPR001680 GO:0005515
Mupr10163g00007 256 SMART WD40_4 3 42 IPR001680 GO:0005515
Mupr10163g00007 256 SMART WD40_4 46 86 IPR001680 GO:0005515
Mupr10163g00007 256 ProSiteProfiles Trp-Asp (WD) repeats profile. 10 42 IPR001680 GO:0005515
Mupr10163g00007 256 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 10 42 - -
Mupr10163g00007 256 ProSiteProfiles Trp-Asp (WD) repeats profile. 135 175 IPR001680 GO:0005515
Mupr10163g00007 256 ProSiteProfiles Trp-Asp (WD) repeats profile. 53 95 IPR001680 GO:0005515
Mupr10163g00007 256 Pfam WD domain, G-beta repeat 9 42 IPR001680 GO:0005515
Mupr10163g00007 256 Pfam WD domain, G-beta repeat 50 86 IPR001680 GO:0005515
Mupr10163g00007 256 Pfam WD domain, G-beta repeat 131 166 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10163g00007 Mupr-Chr10163 16454 19144 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10163g00007 5 167 U-box Gene Family AT2G33340 30.000 5.87e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10163g00007 - - var:108326218 400.979