Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10155g00004 ATGAAGCTCTCTTCTTCTGGATTTAATCAACCGCCTGAGGAAGAAGCCTGTGATTGTGTAGGGGAGAAAAAATGTTTGAATTCTGAACTTTGGCATGCATGTGCTGGCCCTCTGGTTTCTCTGCCTCCTGTTGGAAGTCGTGTAGTCTACTTTCCTCAAGGTCACAGTGAGCAGGTTGCTGCTTCAACCAACAGGGAAGTAGATGCACATATTCCTAATTACCCTAACTTGCCACCACAACTTATTTGTCAGCTTCACAATGTGACGATGCATGCAGATGCTGAAACAGATGAAGTATATGCTCAAATGACTCTGCAACCTCTAAGTCCTCAAGAGCAAAAGGAGGTGTATCTGCTGCCTGCAGAATTGGGTACTCCCAGCAAGCAACCAACCAACTACTTCTGCAAAACATTAACTGCAAGTGATACCAGCACTCATGGAGGATTTTCTGTTCCTCGAAGAGCAGCTGAAAAAGTCTTCCCTCCTCTTGATTACTCACAGCAGCCTCCTGCTCAAGAACTAATTGCCAGAGATCTTCATGATAATGAATGGAAATTCAGACATATATTTCGAGGTCAGCCCAAAAGGCATCTTCTTACTACAGGGTGGAGTGTCTTTGTCAGTGCCAAGAGGCTTGTTGCTGGTGATTCAGTCCTTTTTATCTGGAATGAAAAAAATCAATTACTCTTGGGCATACGGCGAGCGAATCGACCACAGACTATCATGCCGTCATCAGTTCTGTCAAGTGATAGCATGCACATTGGTCTTCTGGCTGCTGCAGCTCATGCAGCTGCCACAAACAGCCGCTTTACTATATTCTATAATCCTAGGGCAAGCCCATCTGAATTTGTTATTCCTTTGGCCAAGTATGTTAAAGCTGTGTATCATACACGAGTTTCTGTTGGCATGCGATTTAGGATGCTCTTTGAGACAGAAGAATCAAGTGTTCGTCGATACATGGGTACCATAACTGGTATTAGTGATTTAGATCCGGTCCGCTGGCCGAATTCACACTGGCGTTCTGTGAAGGTTGGCTGGGATGAGTCCACCGCAGGGGAGAGGCAGCCAAGAGTTTCCTTGTGGGAAATTGAACCTTTAACAACATTCCCAATGTACCCTTCTCCATTCCCCTTAAGGTTGAGGCGCCCTTGGCCATCGGGCCTACCTTCTTTATATGGTCTCAAGGATGTAGACTTGGGCATTGGTTCTCCATTCATGTGGCTCCAAGGTGGGCTGGGGGATCAGGGAATGCAATCTTTAAACTTCCAGGGGCTTGGTGTTACACCATGGATGCAACCTAGATTTGATGCTTCTATACCAGGTCTCCAACCAGAGTTATACCAAGCAATGACTTCTTCTGCATTCCAGGAAATGAGGACAATGGATCCTTCAAAATCTTCCCAATCACTGTTGCAGTTTCAGCAGACTTCAAATGTTCCCAGTGCTCATACTTCTGAGGTACAGAGGCAAGTATTACCACAGTCTCAGCCTCAAAACACCCTTCTACACAATTTTCAAGAAAACCAGGTGCCTGCTCAGTCACAACTTCTGCAACAGCAGTTGCATCGTTACCACCCTTATAGTGATCAGCGGCAACAGCAGCAGCAACTTAAAAACTTGCCTGTTCAGCAGCAGTTACCAAATGTCATCTCCCCTTTGTCTAATTTTGCATCAGGTACCCAGTCTCAATCTCCTCCCATGCAAGCCCTAGCTTCCCATTGCCAGCAGCAGAACTTTCCTGAACCCATCAGAAATCATATTTCCAGTTCTGATGTTTCCCCTATCCAGAGTCTACTTGGTTCATTCTCCCAGGATGGAACATCCCAGTTACTTAACTTGAATGGCTCCAATTCTGTTATATCTTCTGCAGCCATACTACCCAAGCAAATAACTGTTGAACCTCAGCTTCCATCTGCTGCTGCTCCGTGTGTATTGCCTCAGGTGGAAAACTTGGGAACATCACAATCAAATGTGTCTGAACTTGCTGCTTTACCTCCATTTCCGGGAAGAGAACATTCTGCATACCATGGTGCTACTGATCCTCACAGCAATCTTTTATTTGGGATTAACATTGATCCCTCTTCTCTTATGCTGCAAAATGGCATGTCAAACCTAAGAAATATAGGCAATGTGAATGATTCTTTGTCGTTGCCATTTTCTGCTTCAAATTGTGCTGGTGCTACAGGCACTGATTTCCCCTTAAGTTCAAACATGACAACTTCGAGTTGTGTAGATGAATCAGGCTACTTGCAGTCTTCTGAAAATGTAGACCAAGCAAATACACCAACTGGAACCTTTGTTAAGGTTCACAAGTCAGGGTCCTTTGGAAGGTCACTGGACATTTCCAAGTTCAGCAGCTATGATGAGCTGCGAAGCGAGCTTGCTCGCATGTTTGGCCTTGAAGGCCAACTAGAGGACCCTAAGACTCAGAGATCAGGCTGGCAGCTTGTATTTGTTGACCGGGAGAATGATGTTCTTCTTCTTGGTGATGATCCTTGGCAGGAGTTTGTGAACAATGTGTGGCACATAAAGATACTATCTCCACTAGAAGTGCAACAAATGGGCAAAGATCTTAGTCCTTCTACTTCTGCTCCAGGTCACAAACTTTCTACTGCGGGCAACTCTTGTGATAATTATGTGAGTCAACAAGAGTTGAGAAGTTCGAGAAATGGCATGGCATCAATGGGGTCTTTTCACTACTAG 2703 0.4506 MKLSSSGFNQPPEEEACDCVGEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNREVDAHIPNYPNLPPQLICQLHNVTMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGTPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTIMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLRRPWPSGLPSLYGLKDVDLGIGSPFMWLQGGLGDQGMQSLNFQGLGVTPWMQPRFDASIPGLQPELYQAMTSSAFQEMRTMDPSKSSQSLLQFQQTSNVPSAHTSEVQRQVLPQSQPQNTLLHNFQENQVPAQSQLLQQQLHRYHPYSDQRQQQQQLKNLPVQQQLPNVISPLSNFASGTQSQSPPMQALASHCQQQNFPEPIRNHISSSDVSPIQSLLGSFSQDGTSQLLNLNGSNSVISSAAILPKQITVEPQLPSAAAPCVLPQVENLGTSQSNVSELAALPPFPGREHSAYHGATDPHSNLLFGINIDPSSLMLQNGMSNLRNIGNVNDSLSLPFSASNCAGATGTDFPLSSNMTTSSCVDESGYLQSSENVDQANTPTGTFVKVHKSGSFGRSLDISKFSSYDELRSELARMFGLEGQLEDPKTQRSGWQLVFVDRENDVLLLGDDPWQEFVNNVWHIKILSPLEVQQMGKDLSPSTSAPGHKLSTAGNSCDNYVSQQELRSSRNGMASMGSFHY 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10155g00004 900 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 22 856 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mupr10155g00004 900 CDD B3_DNA 133 234 IPR003340 GO:0003677
Mupr10155g00004 900 SMART B3_2 134 236 IPR003340 GO:0003677
Mupr10155g00004 900 Pfam B3 DNA binding domain 134 235 IPR003340 GO:0003677
Mupr10155g00004 900 SUPERFAMILY CAD & PB1 domains 757 840 - -
Mupr10155g00004 900 MobiDBLite consensus disorder prediction 458 490 - -
Mupr10155g00004 900 MobiDBLite consensus disorder prediction 855 875 - -
Mupr10155g00004 900 Pfam Auxin response factor 260 343 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mupr10155g00004 900 Gene3D - 132 235 IPR015300 -
Mupr10155g00004 900 FunFam Auxin response factor 298 370 - -
Mupr10155g00004 900 FunFam Auxin response factor 132 236 - -
Mupr10155g00004 900 Gene3D - 760 855 - -
Mupr10155g00004 900 ProSiteProfiles B3 DNA-binding domain profile. 134 236 IPR003340 GO:0003677
Mupr10155g00004 900 Gene3D - 298 370 - -
Mupr10155g00004 900 SUPERFAMILY DNA-binding pseudobarrel domain 119 263 IPR015300 -
Mupr10155g00004 900 ProSiteProfiles PB1 domain profile. 764 851 IPR000270 GO:0005515
Mupr10155g00004 900 Pfam AUX/IAA family 753 848 IPR033389 -
Mupr10155g00004 900 FunFam Auxin response factor 759 855 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10155g00004 Mupr-Chr10155 19416 27093 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10155g00004 1 491 B3 DNA Binding Superfamily AT1G30330 82.591 0.0 827
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mupr10155g00004 AUX_IAA 3.1e-09 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10155g00004 - - gmx:100809105 1676.37