Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10154g00001 ATGGCCTCAGCAAGCGGAGCAGCGAATTCGTCGGTTCAGCCACAAATCCATAGTTCGAGGACAAAGCTGAGCCAACAGCACATGGAGTCGATGAGCAAGGCCATCGCGCAGTACACGGAGGACGCCAGGCTGCACGCCGTCTTCGAGCAGTCCGGCGAGTCCGGAAGGTCCTTTGACTACTCCCAGTCAATCCGCGTCACGACGGGATCGGTGCCGGAGCAGCAGATAACGGCGTACCTCCTCAGAATCCAGCGCGGCGGCTTCATTCAGCCGTTCGGCTCCATGATCGCCGTGGACGAGCCGTCTTTCCGCGTGCTTGCTTACTCCGAGAACGCGCGCGACATGCTCGGCATTACGCCGCAGTCTGTCCCCTCGCTTGACGACGACAAGGTGGAGGCCTTCGTTCTCGGCGCTGACGTCCGTACTCTGTTCACGCAGTCGAGCGCTCTGCTCCTCGAGAAGGCCTTCTCGGCGCGGGAAATTAGCCTCATGAACCCTATCTGGATCCACTCCCGCACCTCTGGGAAGCCGTTCTACGGCATCCTCCACCGCGTCGACGTCGGAATCGTCATCGATTTGGAGCCCGCGCGGACCGAGGACCCTGCCCTCTCCATCGCCGGCGCCGTCCAGTCGCAGAAGCTCGCCGTTCGCGCTATTTCACAGCTCCAGTCTCTCCCCGGCGGCGACGTGAAGCTTCTCTGCGACACAGTGGTTGAGAGCGTTAGGGAATTGACGGGATACGATAGGGTTATGGTTTACAAGTTTCACGAGGACGAGCACGGAGAGGTTGTGAGTGAGAGTAAGAGGCCCGATTTGGAGCCTTACATTGGTTTGCATTATCCCGCCACGGATATCCCTCAGGCTTCCAGGTTTTTGTTCAAGCAGAATAGGGTTAGGATGATTGTGGATTGTCACGCTTCTTCTGTGAGGGTGGTGCAGGATGAGGCTCTCGTGCAGCCTCTTTGTTTGGTGGGGTCCACTCTTCGCGCCCCCCACGGTTGCCATGCTCAGTATATGGCTAATATGGGTTCCATTGCGTCCTTGGTCATGGCTGTTATTATTAATGGGAATGATGAGGATGGTGTTGCTGTTGGTGGCCGGAGTTCGATGAGGCTGTGGGGGCTTGTTGTTTGCCATCACACTTCTGCTAGGTCTATTCCTTTCCCTTTGAGGTATGCTTGTGAGTTTCTCATGCAGGCCTTTGGGCTTCAGTTGAACATGGAGCTTCAGTTGGCGGCCCAGTCCTTGGAGAAACGGGTTTTGAGGACGCAGACTCTCTTGTGTGATATGCTTCTTAGGGATTCGCCTACTGGCATTGTTACTCAGAGTCCTAGCATTATGGACTTGGTCAAGTGTGATGGGGCTGCTCTTTACTACCACGGGAACTATTATCCCTTGGGGGTTACTCCAACTGAGCCTCAGATAAGGGATATGATTGACTGGTTGTTGGCCTTCCATGGAGATTCGACTGGTTTGAGTACTGATAGTCTTGCTGATGCTGGCTATCCTGGGGCTGCCTCACTTGGGGATGCAGTTTGTGGGATGGCGGTTGCTTATATCACGGAGAAGGATTTTCTTTTCTGGTTCAGGTCCCACACTGCGAAGGAGATCAAATGGGGTGGTGCAAAGCATCATCCTGAGGACAAGGATGATGGGCAGAGAATGCATCCCCGTTCTTCCTTCAAGGCGTTTTTGGAAGTGGTGAAGAGCCGTAGCTTGCCGTGGGAGAATGCAGAAATGGACGCAATTCACTCTTTGCAGCTCATTCTGCGTGACTCATTTAGAGATGCTGAGCATAACAATTCTAAGGCTGTTGTGGATCCCCGTGTGACGGAACTAGAGTTGCAAGGGGTGGATGAACTGAGTTCTGTGGCTAGAGAGATGGTTAGATTGATAGAAACAGCCACTGCTCCTATATTTGCTGTTGATATTGATGGCCACATAAATGGGTGGAATGCAAAGATTTCAGAATTGACAGGACTCCCAGTTGAGGAGGCTATGGGGAAGTCCTTGATTCATGATCTTGTGTTTAAGGAGTCTGAAGAAACGGTGGACAAGCTTCTTTCTCGTGCTTTAAAAGGTGAAGAAGATAAGAATGTTGAGATAAAAATGAGGACGTTTGGCCCAGAACATCAAAATAAAGCAGTTTTTGTAGTGGTGAATGCTTGCTCCAGCAAGGATTATACAAATAATATAGTTGGAGTGTGCTTTGTTGGTCAGGATGTTACTGGTCAAAAAATTGTGATGGACAAATTCATCAACATACAAGGTGATTACAAGGCTATTGTACATAGTCCAAATCCTTTGATCCCTCCCATTTTTGCATCGGACGATAACACATGTTGCTTAGAGTGGAACACTGCCATGGAAAAGCTTACTGGTTGGGGCCGTGCAGACGTCATTGGAAAAATGTTGGTGGGAGAGGTTTTTGGTAGTTTCTGTCAGTTGAAGGGTTCAGATGCAATAACAAAGTTTATGATTGTCTTACACAATGCGCTTGGTGGACAAGATACAGATAAATTCCCTTTTTCATTTCTTGATCGGCATGGAAAGTATGTACAAACTTTCTTGACTGCAAATAAGAGGGTTAACATGGATGGTCAGATCATTGGGGCTTTTTGTTTTTTGCAAATTGTGAGTCCTGAACTTCAACAGGCTCTGAAGGCCCAGAGACAACAAGAGAAGAATTCCTTTGCTAAGATGAAAGAGTTAGCTTATATTTGTCAAGGAGTAAAGAATCCTCTGAGTGGCATACGCTTTACAAACTCTCTTTTGGAGGGTACAGGCTTGACTGATGAGCAAAAGCAGTTTCTTGAGACTAGTGCTGCTTGTGAGAAGCAAATGTTAAAGATAACACGTGACGTTGATCTTGAACGCATTGAGGAT 2886 0.4958 MASASGAANSSVQPQIHSSRTKLSQQHMESMSKAIAQYTEDARLHAVFEQSGESGRSFDYSQSIRVTTGSVPEQQITAYLLRIQRGGFIQPFGSMIAVDEPSFRVLAYSENARDMLGITPQSVPSLDDDKVEAFVLGADVRTLFTQSSALLLEKAFSAREISLMNPIWIHSRTSGKPFYGILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDVKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVSESKRPDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASSVRVVQDEALVQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDEDGVAVGGRSSMRLWGLVVCHHTSARSIPFPLRYACEFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGNYYPLGVTPTEPQIRDMIDWLLAFHGDSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEHNNSKAVVDPRVTELELQGVDELSSVAREMVRLIETATAPIFAVDIDGHINGWNAKISELTGLPVEEAMGKSLIHDLVFKESEETVDKLLSRALKGEEDKNVEIKMRTFGPEHQNKAVFVVVNACSSKDYTNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFASDDNTCCLEWNTAMEKLTGWGRADVIGKMLVGEVFGSFCQLKGSDAITKFMIVLHNALGGQDTDKFPFSFLDRHGKYVQTFLTANKRVNMDGQIIGAFCFLQIVSPELQQALKAQRQQEKNSFAKMKELAYICQGVKNPLSGIRFTNSLLEGTGLTDEQKQFLETSAACEKQMLKITRDVDLERIED 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10154g00001 962 ProSitePatterns Phytochrome chromophore attachment site signature. 329 338 IPR013516 -
Mupr10154g00001 962 SUPERFAMILY PYP-like sensor domain (PAS domain) 83 199 IPR035965 -
Mupr10154g00001 962 CDD PAS 635 742 IPR000014 -
Mupr10154g00001 962 SMART pas_2 82 152 IPR000014 -
Mupr10154g00001 962 SMART pas_2 757 827 IPR000014 -
Mupr10154g00001 962 SMART pas_2 626 693 IPR000014 -
Mupr10154g00001 962 FunFam Phytochrome 771 879 - -
Mupr10154g00001 962 SMART HisKA_10 899 962 IPR003661 GO:0000155|GO:0007165
Mupr10154g00001 962 SUPERFAMILY PYP-like sensor domain (PAS domain) 772 875 IPR035965 -
Mupr10154g00001 962 Gene3D - 882 962 - -
Mupr10154g00001 962 Gene3D PAS domain 771 881 - -
Mupr10154g00001 962 CDD HisKA 899 959 IPR003661 GO:0000155|GO:0007165
Mupr10154g00001 962 FunFam Phytochrome 414 544 - -
Mupr10154g00001 962 SMART gaf_1 229 419 IPR003018 GO:0005515
Mupr10154g00001 962 Pfam His Kinase A (phospho-acceptor) domain 902 961 IPR003661 GO:0000155|GO:0007165
Mupr10154g00001 962 SUPERFAMILY GAF domain-like 417 594 - -
Mupr10154g00001 962 ProSiteProfiles PAS repeat profile. 624 695 IPR000014 -
Mupr10154g00001 962 Pfam PAS fold 78 196 IPR013654 GO:0006355
Mupr10154g00001 962 ProSiteProfiles Phytochrome chromophore attachment site domain profile. 229 399 IPR016132 -
Mupr10154g00001 962 SUPERFAMILY GAF domain-like 209 406 - -
Mupr10154g00001 962 PRINTS Phytochrome signature 144 166 IPR001294 GO:0006355|GO:0009584
Mupr10154g00001 962 PRINTS Phytochrome signature 329 350 IPR001294 GO:0006355|GO:0009584
Mupr10154g00001 962 PRINTS Phytochrome signature 627 643 IPR001294 GO:0006355|GO:0009584
Mupr10154g00001 962 PRINTS Phytochrome signature 244 263 IPR001294 GO:0006355|GO:0009584
Mupr10154g00001 962 PRINTS Phytochrome signature 439 459 IPR001294 GO:0006355|GO:0009584
Mupr10154g00001 962 PRINTS Phytochrome signature 557 575 IPR001294 GO:0006355|GO:0009584
Mupr10154g00001 962 PRINTS Phytochrome signature 646 661 IPR001294 GO:0006355|GO:0009584
Mupr10154g00001 962 PRINTS Phytochrome signature 740 760 IPR001294 GO:0006355|GO:0009584
Mupr10154g00001 962 PRINTS Phytochrome signature 524 543 IPR001294 GO:0006355|GO:0009584
Mupr10154g00001 962 PRINTS Phytochrome signature 720 737 IPR001294 GO:0006355|GO:0009584
Mupr10154g00001 962 ProSiteProfiles PAS repeat profile. 758 810 IPR000014 -
Mupr10154g00001 962 Pfam GAF domain 230 409 IPR003018 GO:0005515
Mupr10154g00001 962 Gene3D - 414 587 IPR043150 -
Mupr10154g00001 962 NCBIfam PAS domain S-box protein 631 746 IPR000014 -
Mupr10154g00001 962 SUPERFAMILY PYP-like sensor domain (PAS domain) 631 739 IPR035965 -
Mupr10154g00001 962 CDD PAS 769 877 IPR000014 -
Mupr10154g00001 962 PANTHER OS08G0260000 PROTEIN 73 960 - -
Mupr10154g00001 962 Gene3D PAS domain 622 746 - -
Mupr10154g00001 962 Pfam PAS fold 627 742 IPR013767 GO:0006355
Mupr10154g00001 962 Pfam PAS fold 758 877 IPR013767 GO:0006355
Mupr10154g00001 962 CDD DOMON_like 455 543 - -
Mupr10154g00001 962 Gene3D PAS domain 83 332 - -
Mupr10154g00001 962 FunFam Phytochrome 880 961 - -
Mupr10154g00001 962 MobiDBLite consensus disorder prediction 1 31 - -
Mupr10154g00001 962 FunFam Phytochrome 620 752 - -
Mupr10154g00001 962 Gene3D - 210 570 IPR029016 -
Mupr10154g00001 962 Pfam Phytochrome region 422 595 IPR013515 GO:0006355|GO:0009584
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10154g00001 Mupr-Chr10154 2460 6053 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10154g00001 13 962 Histidine Kinase Gene Family AT2G18790 78.788 0.0 1590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10154g00001 K12121 - gmx:100799831 1791.93