Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1013g00010 ATGTCCGCCGACACTCCCGCCGCTCCTAATATCAATCCCAGAGGCCTCCTCTGTAATGCCGCCGCCGGTGCTTCCGCCGGAGTTATTGCTGCTACATTTGTGTGTCCTTTAGATGTCATCAAAACTAGGTTTCAGGTTCATGGTGTACCGCAGCTTGCCAATGGAACTGTTAAAGGCAGCGTAATAGTTGGTAGTTTGGAACAAATATTTCACAAGGAGGGGTTACGTGGCATGTACCGTGGGCTTGCTCCCACTGTGCTGGCTTTACTTCCAAACTGGGCGGTTTATTTTAGTGTGTATGAGCATCTTAAGAGCATTCTTCATTCTGATGATGGAAGCCAACATCTTTCAATTGGAGCTAATATGGTAGCTGCTTCTGGTGCTGGAGCTGCAACTACCATGTTTACAAATCCCCTTTGGGTTGTCAAGACTAGACTCCAAACCCAGGGAATGAGACCTGGTGTTGTGCCATATAGGGGCACGTTCTCTGCATTGAGGAGAATTGCACATGAGGAGGGTATTCGGGGGCTTTACAGTGGCCTTGTACCTGCTCTGGCTGGTATCAGTCATGTTGCCATCCAATTTCCGACGTATGAGACTATAAAAGTTTATTTGGCAAATAAAGATGACACCGCAATGGATAAACTTGGTGCACGTGATGTTGCAATTGCATCATCAGTTTCCAAAATTTTTGCATCCACATTGACATATCCTCACGAGGTTGTACGTTCCAGACTGCAAGAACAAGGGCATCATTCAGAGAAACGATACTCTGGTGTGATCGACTGTGTTAGAAAGGTTTTTCAACAAGAAGGTGTACAGGGTTTTTACCGAGGTTGTGCCACCAACCTTCTGAGGACAACGCCAGCTGCTGTAATCACATTCACCAGCTTTGAAATGATACACCGATTTCTCGTTTCAGTTTTTCCTTCTGATCCACAGCCTCACATTTTGTGA 957 0.4608 MSADTPAAPNINPRGLLCNAAAGASAGVIAATFVCPLDVIKTRFQVHGVPQLANGTVKGSVIVGSLEQIFHKEGLRGMYRGLAPTVLALLPNWAVYFSVYEHLKSILHSDDGSQHLSIGANMVAASGAGAATTMFTNPLWVVKTRLQTQGMRPGVVPYRGTFSALRRIAHEEGIRGLYSGLVPALAGISHVAIQFPTYETIKVYLANKDDTAMDKLGARDVAIASSVSKIFASTLTYPHEVVRSRLQEQGHHSEKRYSGVIDCVRKVFQQEGVQGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVSVFPSDPQPHIL 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1013g00010 318 SUPERFAMILY Mitochondrial carrier 16 300 IPR023395 -
Mupr1013g00010 318 FunFam Mitochondrial nicotinamide adenine dinucleotide transporter 1 113 308 - -
Mupr1013g00010 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 14 106 IPR018108 -
Mupr1013g00010 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 216 304 IPR018108 -
Mupr1013g00010 318 PRINTS Mitochondrial carrier protein signature 131 149 IPR002067 GO:0055085
Mupr1013g00010 318 PRINTS Mitochondrial carrier protein signature 19 32 IPR002067 GO:0055085
Mupr1013g00010 318 PRINTS Mitochondrial carrier protein signature 225 247 IPR002067 GO:0055085
Mupr1013g00010 318 PRINTS Mitochondrial carrier protein signature 32 46 IPR002067 GO:0055085
Mupr1013g00010 318 PRINTS Mitochondrial carrier protein signature 81 101 IPR002067 GO:0055085
Mupr1013g00010 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 116 204 IPR018108 -
Mupr1013g00010 318 FunFam Nicotinamide adenine dinucleotide transporter 1, chloroplastic 2 112 - -
Mupr1013g00010 318 Gene3D Mitochondrial carrier domain 4 111 IPR023395 -
Mupr1013g00010 318 Gene3D Mitochondrial carrier domain 112 308 IPR023395 -
Mupr1013g00010 318 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 17 307 IPR044712 GO:0006862|GO:0055085
Mupr1013g00010 318 Pfam Mitochondrial carrier protein 222 306 IPR018108 -
Mupr1013g00010 318 Pfam Mitochondrial carrier protein 16 109 IPR018108 -
Mupr1013g00010 318 Pfam Mitochondrial carrier protein 115 208 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1013g00010 Mupr-Chr1013 60069 63647 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1013g00010 12 318 Chloroplast and Mitochondria Gene Families AT2G47490 76.873 3.89e-164 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1013g00010 K15115 - gmx:100500213 578.17