Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1013g00001 ATGGTTTCGCTGAAACTGCAGAAGCGGCTGGCCGCAAGCGTGCTCAAGTGCGGTAGAGGAAAGGTTTGGCTTGACCCCAATGAAGTCAACGAAATCTCCATGGCCAATTCGCGCCAAAACATAAGGAAGCTGGTTAAGGATGGGTTTATTATCAGGAAACCCACCAAGATTCACTCTCGCTCACGTGCCCGTCGAATGAAGGAAGCTAAGAGGAAAGGACGCCACTCTGGATATGGTAAGCGTAAGGGTACAAGGGAGGCAAGGCTTCCCACTAAAATTCTTTGGATGAGGAGAATGCGAGTGCTCAGACGCTTGCTTCGCAAGTACAGGGAATCTAAGAAGATTGACAAGCACATGTACCATGACATGTACATGAAGGTTAAGGGTAATGTTTTCAAGAACAAGAGGGTTTTAATGGAGAGCATTCACAAGTCCAAAGCTGAGAAGGCAAGAGAGAAGACTTTGTCTGATCAATTTGAGGCCAAGCGTGCCAAGAACAAGGCAAGCAGGGAAAGGAAAATTGCTCGGAGGGAGGAGCGATTTGCCCAAGGTCCTGGAGAAAAGGTATCAGCTGCACCCAGTGCTGCACCTGCTACAGCATCACAGCCAGCTCAAGCATCAAAGAAATCCAAGAAGAAGATTCCAGTTCTCCGTATTCGTTGA 663 0.4811 MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREERFAQGPGEKVSAAPSAAPATASQPAQASKKSKKKIPVLRIR 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1013g00001 220 Pfam Ribosomal protein L19e 4 145 IPR000196 GO:0003735|GO:0005840|GO:0006412
Mupr1013g00001 220 Gene3D - 57 190 - -
Mupr1013g00001 220 Hamap 50S ribosomal protein L19e [rpl19e]. 3 149 IPR000196 GO:0003735|GO:0005840|GO:0006412
Mupr1013g00001 220 PANTHER 60S RIBOSOMAL PROTEIN L19 1 188 IPR039547 GO:0003723|GO:0003735|GO:0022625
Mupr1013g00001 220 MobiDBLite consensus disorder prediction 57 85 - -
Mupr1013g00001 220 CDD Ribosomal_L19e_E 4 167 IPR033935 GO:0003735|GO:0022625
Mupr1013g00001 220 SUPERFAMILY Ribosomal protein L19 (L19e) 3 144 IPR035970 GO:0003735|GO:0005840|GO:0006412
Mupr1013g00001 220 Gene3D - 2 56 IPR015972 GO:0003735|GO:0005840|GO:0006412
Mupr1013g00001 220 MobiDBLite consensus disorder prediction 149 220 - -
Mupr1013g00001 220 SMART Ribosomal_L19e_2 3 146 IPR000196 GO:0003735|GO:0005840|GO:0006412
Mupr1013g00001 220 MobiDBLite consensus disorder prediction 149 184 - -
Mupr1013g00001 220 ProSitePatterns Ribosomal protein L19e signature. 7 26 IPR023638 -
Mupr1013g00001 220 FunFam Ribosomal protein L19 57 195 - -
Mupr1013g00001 220 MobiDBLite consensus disorder prediction 57 79 - -
Mupr1013g00001 220 FunFam Ribosomal protein L19 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1013g00001 Mupr-Chr1013 3138 5147 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1013g00001 1 212 Cytoplasmic Ribosomal Protein Gene Family AT3G16780 84.434 1.88e-128 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1013g00001 K02885 - gmx:100527501 367.081