Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10139g00001 ATGATGAGTTCGCTAGCAACAGAGAAAGGGTGGAGGAAAGGCCCTTGGACTGGTGAAGAGGACAAGTTGCTAAGCGAATATGTTAGCTTGCATGGGGAGGGTAGGTGGAGTTCGGTGGCCGAGCTTACAGGATTAAATAGAAGCGGCAAAAGCTGCAGGTTAAGATGGGTAAATTATTTGAGGCCCGGCCTCAAGAAAGGTCAATTAACACCTCTGGAAGAAGGAATCATTATTGAACTACATGCAATTTGGGGTAACAAGTGGTCTACAATAGCAAAGTACTTGCCGGGTAGAACAGATAACGAGATTAAAAACTACTGGAGAACGCACTTCGGAAAAAGGGAGAAATCCAAACACAAGATAGAAAGGCAAAAAACAAAGGTGCTAAAACAGTTGAAACAAAAGCGACAACAGGAATTACAACAACCGCAGGAGTATGATATCAAAAGCATCATGTCTCATGAACAGACCAAAACAGAAACAAAATCCTTTGAGACACAAAATAATGAGCAACTACAAATGGGTTTCATGTACCCAACATTAGAGCAACAATATACCGTTCCTTCAATGCATGAGGGATTCTCATCCACGTGGCCAAACACACTAGCGGGTGATGACTCATGGTTTAGTTTATGGGACTTCGACGAACCACAAGGTTTTTCTGCTTATGTTAATCACTTTAGTAAATGTGCTATGCCAAATCAAGCTACCTTTGGAGTTGGAGGGGATTCCATGCAAAATCACGATAAAACTATTTGTTTTGATGATACATACGGTTACCTCTTTTAG 789 0.4144 MMSSLATEKGWRKGPWTGEEDKLLSEYVSLHGEGRWSSVAELTGLNRSGKSCRLRWVNYLRPGLKKGQLTPLEEGIIIELHAIWGNKWSTIAKYLPGRTDNEIKNYWRTHFGKREKSKHKIERQKTKVLKQLKQKRQQELQQPQEYDIKSIMSHEQTKTETKSFETQNNEQLQMGFMYPTLEQQYTVPSMHEGFSSTWPNTLAGDDSWFSLWDFDEPQGFSAYVNHFSKCAMPNQATFGVGGDSMQNHDKTICFDDTYGYLF 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10139g00001 262 CDD SANT 70 111 IPR001005 -
Mupr10139g00001 262 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Mupr10139g00001 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 115 IPR017930 -
Mupr10139g00001 262 SMART sant 65 113 IPR001005 -
Mupr10139g00001 262 SMART sant 12 62 IPR001005 -
Mupr10139g00001 262 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 9 178 IPR044676 GO:0003700|GO:0006355|GO:0043565
Mupr10139g00001 262 Gene3D - 69 114 - -
Mupr10139g00001 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 64 IPR017930 -
Mupr10139g00001 262 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Mupr10139g00001 262 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Mupr10139g00001 262 CDD SANT 15 60 IPR001005 -
Mupr10139g00001 262 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Mupr10139g00001 262 FunFam Myb transcription factor 13 65 - -
Mupr10139g00001 262 Coils Coil 118 138 - -
Mupr10139g00001 262 Gene3D - 13 65 - -
Mupr10139g00001 262 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10139g00001 Mupr-Chr10139 5898 7525 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10139g00001 10 222 MYB Transcription Factor Family AT3G30210 52.055 1.21e-68 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr10139g00001 Myb_DNA-binding 6.3e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10139g00001 K09422 - gmx:100785540 413.305