Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1012g00004 ATGACTCATCCCTACTGCTCCAACGACTTCAATGCTTGGTTTGACCTCAATTCTCCATGCCTTTTCTCTTCTTCTTCATCAACTTGCTCCAACCCTCCATTCTATTTTCCTTCTACTTATCACCATAACTTCACAACCGGCATCTCTTCTACTCAGCATCATCAATCTTCTCCCTCCTCTCACCCTCCAAAAGAAGCCCTTCCTCTCCTTAACCTAAGCCCTCCAAGAGGTCAAGATCTTGAATCTTCCTTTAGTGCCATGAAAGTAGTGAAGGAGAAAGAACTAATTAGCATGTCATCTTTGGATGATGAAACTGTGACGGTGGCTTTGCACTTAGGGCTTGCAAGCACTACTACTTCACATGATTTAACTTCAAACGTGTACTCAGAGAAAGAAGAAAAAGCCACGGTTGCTTCTGAGTATTCGCCTACTAGAATTAACAAGGGTCAGTATTGGATCCCTACCCCTTCTCAAATTCTGATCGGTCCAACACAGTTCTCATGCCCCCTTTGTTTCAAGACGTTCAACAGATACAACAACATGCAGATGCACATGTGGGGGCATGGTTCTCAATATAGAAAGGGGCCAGAGTCTCTAAGGGGAACTCAACCAACAGCAATGCTTAGACTCCCATGCTATTGCTGTGCACCAGGATGCAAGAACAACATTGACCATCCAAGAGCAAAGCCACTCAAAGACTTTAGGACCCTCCAAACCCATTATAAGAGAAAGCATGGCATCAAGCCTTTTATGTGTAGGAAATGTTGCAAAGCATTTGCTGTGAGAGGTGATTGGAGAACTCACGAGAAGAACTGTGGGAAGCTTTGGTATTGCTCTTGTGGCTCCGATTTTAAGCACAAAAGATCTCTTAAGGATCATATCAAGGCGTTTGGGAATGGACATAAAGCTTATGGAATCGACTCTCTTGATCAAGATGATGAAGCCGCCTCTGAAATTGAGCAAGAAAATAATGAATCTTTAATTTCTAGTCATAGTTGA 999 0.4304 MTHPYCSNDFNAWFDLNSPCLFSSSSSTCSNPPFYFPSTYHHNFTTGISSTQHHQSSPSSHPPKEALPLLNLSPPRGQDLESSFSAMKVVKEKELISMSSLDDETVTVALHLGLASTTTSHDLTSNVYSEKEEKATVASEYSPTRINKGQYWIPTPSQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHIKAFGNGHKAYGIDSLDQDDEAASEIEQENNESLISSHS 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1012g00004 332 ProSiteProfiles Zinc finger C2H2 type domain profile. 166 193 IPR013087 -
Mupr1012g00004 332 MobiDBLite consensus disorder prediction 47 73 - -
Mupr1012g00004 332 MobiDBLite consensus disorder prediction 47 62 - -
Mupr1012g00004 332 ProSitePatterns Zinc finger C2H2 type domain signature. 168 188 IPR013087 -
Mupr1012g00004 332 Gene3D Classic Zinc Finger 165 188 - -
Mupr1012g00004 332 FunFam Zinc finger protein WIP2 219 301 - -
Mupr1012g00004 332 SUPERFAMILY beta-beta-alpha zinc fingers 232 270 IPR036236 -
Mupr1012g00004 332 PANTHER ZINC FINGER PROTEIN WIP2 38 325 IPR043584 GO:0003700|GO:0010468
Mupr1012g00004 332 Gene3D Classic Zinc Finger 248 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1012g00004 Mupr-Chr1012 31439 33534 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1012g00004 1 321 C2H2 Transcription Factor Family AT1G51220 59.827 2.86e-133 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr1012g00004 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1012g00004 - - gmx:100801922 598.201