Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10128g00001 ATGAACAGGGGAATTGAAGTTCTTTCTCCAGCCTCATACCTCCAGAGTTCCAATTGGTTGTTCCAAGAAAGCTTGGGGACCAGGTGGACTCCCCAGGAGAACAAGCTGTTTGAGAATGCTTTGGCTGTGTATGACAAGGACACTCCAGACCGTTGGATGAAGGTGGCAGCCTTGATTCCTGGCAAGACTGTTGGTGATGTGATCAAACAGTACAGAGAACTGGAAGAAGATGTGAGTGTCATTGAATCTGGGTTTATCCCAGTTCCAGGGTACACCAATGATTCCTTCACATTGGAGTGGGTCAATAATCATGGATTTGATGGTTTCAAGCAGTTCTATGGTGTTGCTGGCAAAAGGGGTGCTTCCACTAGACCATCTGAGCAGGAGAGGAAGAAAGGAGTGCCATGGACTAAAGAGGAGCACAGGCAATTTCTGATGGGTCTGAAGAAGTATGGCAAAGGTGATTGGAGAAACATCTCTCGCAATTTTGTGACCACAAGGACACCAACGCAGGTAGCAAGTCATGCTCAGAAGTACTTCATCAGGCAGCTAACTGGAGGAAAAGATAAGAAGAGATCAAGTATCCATGACATCACAATGGTGAATCTCCCAGAAACAAAGTCCCTTTCACCAGAGAGTAACAGAACCCCTTCACCAGATCATTCAGTGAAGGATGTGAATCCACAACAGAGTCAGAGATTGTCTACCTTGGTTAAACAGGAACATGACTGGAAATTGCCATGTGAGAGTGTGCCTATGCTTTTCAACTCCACAAATGGAAACATGTTCATGACACCACTGTGTGGGATTTCTTCACATGGTTCTAAACCACTTCAGGAACAGTACTTGTTCACTGGCTCTCTCCATGGATGCCAATTTGGACCTTATGAAACTATTTTGCAAATGCAGTCCATGCAAAATCAATGA 927 0.4498 MNRGIEVLSPASYLQSSNWLFQESLGTRWTPQENKLFENALAVYDKDTPDRWMKVAALIPGKTVGDVIKQYRELEEDVSVIESGFIPVPGYTNDSFTLEWVNNHGFDGFKQFYGVAGKRGASTRPSEQERKKGVPWTKEEHRQFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQLTGGKDKKRSSIHDITMVNLPETKSLSPESNRTPSPDHSVKDVNPQQSQRLSTLVKQEHDWKLPCESVPMLFNSTNGNMFMTPLCGISSHGSKPLQEQYLFTGSLHGCQFGPYETILQMQSMQNQ 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10128g00001 308 SUPERFAMILY Homeodomain-like 129 183 IPR009057 -
Mupr10128g00001 308 ProSiteProfiles Myb-like domain profile. 128 180 IPR001005 -
Mupr10128g00001 308 FunFam Transcription factor SRM1 21 88 - -
Mupr10128g00001 308 Pfam Myb-like DNA-binding domain 135 180 IPR001005 -
Mupr10128g00001 308 NCBIfam myb-like DNA-binding domain, SHAQKYF class 131 183 IPR006447 GO:0003677
Mupr10128g00001 308 SUPERFAMILY Homeodomain-like 27 83 IPR009057 -
Mupr10128g00001 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 128 184 IPR017930 -
Mupr10128g00001 308 ProSiteProfiles SANT domain profile. 24 79 IPR017884 -
Mupr10128g00001 308 SMART sant 25 77 IPR001005 -
Mupr10128g00001 308 SMART sant 132 182 IPR001005 -
Mupr10128g00001 308 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 23 258 IPR043363 -
Mupr10128g00001 308 Gene3D - 22 88 - -
Mupr10128g00001 308 CDD SANT 135 180 IPR001005 -
Mupr10128g00001 308 MobiDBLite consensus disorder prediction 199 232 - -
Mupr10128g00001 308 FunFam transcription factor MYB1R1 134 185 - -
Mupr10128g00001 308 CDD SANT 28 74 IPR001005 -
Mupr10128g00001 308 ProSiteProfiles SANT domain profile. 136 184 IPR017884 -
Mupr10128g00001 308 Gene3D - 134 184 - -
Mupr10128g00001 308 MobiDBLite consensus disorder prediction 191 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10128g00001 Mupr-Chr10128 2402 4225 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr10128g00001 Myb_DNA-binding 4.4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10128g00001 - - gmx:778077 560.451