Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10115g00001 ATGGAATCCCCCGGTAACGAGCATGTGGTGGGTGGCGCAGAACCCAACGACGTCGTTACACCCTTTTCCCACAGAGAAGAACCCCACAATTCCCAACCCCTCACCGGCGATGGTGCCAGTCCCGGATTAGATGTTAATAATGTTCTTAGATTTGGTTCTAATTGTACTCGACCCATAATTTGCAGAAAGATATTTATAGGTGGTTTAGCGAGAGAAACAACCATTGCTCAATTTATCAAGCACTTTGGTAAATATGGTGAGATAACGGATTCGGTCATCATGAAGGACAGGAAAACTGGGCAGCCTCGTGGATTCGGGTTTATAACGTATGCGGATCCCTCGGTGGTCGATAAAGTTATTGAGGACCCTCATATCATCAATGGAAAACAAGTTGAGATTAAGCGGACGATACCGAGGGGAGCTGTTGGCTCTAAGGATTTTAGGACAAAGAAAATTTTTGTAGGTGGAATTCCTTCAAATGTGACTGAAGAGAGATGCACTTGTGCAGATGAATTTAGAGACTTCTTTACACGCTACGGCGAAGTCAAAGATAACCAAATAATGCGGGACCACTCTACCAATCGATCTCGTGGATTTGGGTTCATCACATTTGACTCTGAAGAAGCAGTTGATGATCTTCTATCCATGGGGAACAAAATTGAATTTGCTGGAGCTCAGGTGGAAATCAAGAAGGCTGAACCAAAGAAGCCAAACTCAGCACCTCCATCGTTGAAGCGCTACAATGACTCAAGGTCCTCATACAGTAGTGGTGGATATGGAGATGCTTACGATGGATTTGGTGGCAGCTTTGGAGTTGGGGGTGGTTACAGGTCAGCTGGTGTCTATGGTGGTGCTAGGGGTGGTGCTAGTGCTGGTGCCGGTGCTTATGGTGGCTATGGAAGTGAATTTGGTGGGTATGGAGGATATGCCAGTGCAATGGGGCCCTATAGAGGAGACCCCTCCCTTGGGTATGCTGGTCGATATGGCGCAGGAAGCTTTAGCAGAGGGTATGATCTTGGTGGGTATGGTGGAGCTAGTGAGAATTATGGTGCATATGGTGGTGGTGGGGGTTCTTCTGCTGGTGGTGGTGCTTATCAAAGTGGCTATGATGGCAACCTAGGAGGTGGATATGGAGGGGCTAGTGGAGGCCCCTTCTATGGAAGCAGTAGAGGAGGATACAGTGCTGGTCGATATCATCCTTATGGAAGATAA 1212 0.4744 MESPGNEHVVGGAEPNDVVTPFSHREEPHNSQPLTGDGASPGLDVNNVLRFGSNCTRPIICRKIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDKVIEDPHIINGKQVEIKRTIPRGAVGSKDFRTKKIFVGGIPSNVTEERCTCADEFRDFFTRYGEVKDNQIMRDHSTNRSRGFGFITFDSEEAVDDLLSMGNKIEFAGAQVEIKKAEPKKPNSAPPSLKRYNDSRSSYSSGGYGDAYDGFGGSFGVGGGYRSAGVYGGARGGASAGAGAYGGYGSEFGGYGGYASAMGPYRGDPSLGYAGRYGAGSFSRGYDLGGYGGASENYGAYGGGGGSSAGGGAYQSGYDGNLGGGYGGASGGPFYGSSRGGYSAGRYHPYGR 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10115g00001 403 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 152 226 IPR000504 GO:0003723
Mupr10115g00001 403 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 64 130 IPR000504 GO:0003723
Mupr10115g00001 403 Gene3D - 61 141 IPR012677 -
Mupr10115g00001 403 Gene3D - 150 238 IPR012677 -
Mupr10115g00001 403 FunFam Heterogeneous nuclear ribonucleoprotein 1 61 143 - -
Mupr10115g00001 403 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 62 138 IPR000504 GO:0003723
Mupr10115g00001 403 MobiDBLite consensus disorder prediction 1 39 - -
Mupr10115g00001 403 SUPERFAMILY RNA-binding domain, RBD 62 164 IPR035979 GO:0003676
Mupr10115g00001 403 SMART rrm1_1 63 134 IPR000504 GO:0003723
Mupr10115g00001 403 SMART rrm1_1 151 230 IPR000504 GO:0003723
Mupr10115g00001 403 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 150 234 IPR000504 GO:0003723
Mupr10115g00001 403 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 62 403 - -
Mupr10115g00001 403 MobiDBLite consensus disorder prediction 231 251 - -
Mupr10115g00001 403 SUPERFAMILY RNA-binding domain, RBD 139 242 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10115g00001 Mupr-Chr10115 5177 8673 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10115g00001 64 224 Eukaryotic Initiation Factors Gene Family AT1G71770 25.989 2.82e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10115g00001 K12741 K14314 gmx:100793209 523.857