Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10114g00002 ATGAGCAACAGTACTGATTCCTCTGGATTCCTTGGCTCAAACGACATAAGTGGCTTTGGCATGGGGATAGGGATTTCAATTGGGATTCTTCTGCTCATCACAACCATCACACTCACTTCCTATTTCTGCACCAGGGCACAGGTGCCAGCTGCTCCAAGGAGAACTAGTACTAGCACTGGCCCACAATTCCTTGAGCCACAGCACACAATAATTGATGTTGGGCTAGATGAGGCCACAATCATGAATTACCCAAAGATGCTCTACTCTGAAGCCAAGCTAAGGAAATCTGATTCCACAGCAACAAGCTGTTCCATATGTCTGGGAGATTACAAAAGTTCTGATTTGCTAAGGGTGTTGCCTGATTGTGACCATGTCTTCCACCTCAAGTGCATAGACCCCTGGTTGAGGCTACATCCAACTTGTCCTCTCTGCAGAACTTCTCCAATCCCAACACCTCTCTCAACACCTCTGGCTGAAGTGGTTTGGAAACAGAGGAGAGGCCCTATGTCACGCATAAGGAAGAGAATTAATCTCAAGAACGAATGA 546 0.467 MSNSTDSSGFLGSNDISGFGMGIGISIGILLLITTITLTSYFCTRAQVPAAPRRTSTSTGPQFLEPQHTIIDVGLDEATIMNYPKMLYSEAKLRKSDSTATSCSICLGDYKSSDLLRVLPDCDHVFHLKCIDPWLRLHPTCPLCRTSPIPTPLSTPLAEVVWKQRRGPMSRIRKRINLKNE 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10114g00002 181 CDD RING-H2_EL5-like 102 145 - -
Mupr10114g00002 181 FunFam E3 ubiquitin-protein ligase ATL6 65 150 - -
Mupr10114g00002 181 ProSiteProfiles Zinc finger RING-type profile. 103 145 IPR001841 -
Mupr10114g00002 181 SMART ring_2 103 144 IPR001841 -
Mupr10114g00002 181 Pfam Ring finger domain 102 145 IPR001841 -
Mupr10114g00002 181 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 3 159 IPR045899 -
Mupr10114g00002 181 SUPERFAMILY RING/U-box 79 151 - -
Mupr10114g00002 181 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 149 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10114g00002 Mupr-Chr10114 12821 14648 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10114g00002 2 161 C3H Transcription Factor Family AT2G35910 60.494 5.94e-56 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10114g00002 - - gmx:121172638 259.225