Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10104g00003 ATGCAAATGAAGTCAACTAGGCTTAAGCGAGTATCTTGGTGCACAACACACAAATTCAACACCAACTTCAACGTGATTTTTGGTGGCAACATGGAATCAACCTCATCAAACCCAAAAGAGCACCATCATCCAAAGAACACCAAGATCCCTCCCACATTCAAAACCATTAGATTCATGGGTTTTCTAACTCACATTAATTATTTGTTGATTTATTTTCTCATATTTTCCATCTTCTATTTGGGTGTAAGCTCTGTGAATGATACAATCACATCAACCGATTTCATCAGGGACCCCAATACAATAAGCTCAACCAACGGTGACCTCAAGCTAGGATTCTTCAGTCCTGAAAAGTCCACTCATCGCTATGTAGCAATCTGGTTTCTCTCTGAATCCAACATCATTTGGATAGCAAATAGAGACCAACCACTTAATGATTCATCTGGGGTGTTCAAAATTCACAAGGATGGGAATCTTGTGGTATTGAATGGACAAAACCATGTCCTATGGTCAACAAATGTGTCAATTAATGCTACCAATACAACTGCGCAACTTGATGATTCAGGAAATCTGATCTTGCGTGATGACACGAGTGGAACACCAATATGGGACAGTTTCACACACCCTGCTGGTATTGCAGTGCCACAGATGAAAATTGCTGCCAACAGGATCACAGGTAAGAAAATTGAGTATGTGTCATGGAAGAGCAGTTCTGACCCTTCTTCTGGGTACTTTACTGGGAGCCTTGAACGCTTGGATGCTCCAGAAGTGTTTTTTTGGTACAACAAAACAACACCATATTGGAGAACTGGTCCATGGAACGGAAGGGTCTTCCTTGGGTCACCAAGGATGTTAACTGAGTACCTATATGGGTGGCGTTTGGAGCCTAACGATAATGGAACTGCTTATCTAACTTACAATTTTGAAAACCCTTCTATGTTTGGAATCTTGACCATCACTCCAAGTGGGACACTTAAATTGGTAGAGTTTATGAACAAAAAGCAATTTCTGGAACTTGAGGTGGATCAAAATGAATGTGACTTATATGGCAAGTGTGGGCCTTTTGGAAGCTGTGACAATTCAACATTACCAATTTGCAGCTGTCTTGAGGGGTTTGAGGCCAGGAATCCAGAGGAATGGAACAGGAAAAATTGGACTGGTGGGTGTGTGAGGAATGTGCCACTGAATTGTGAGAATGTGAAGAATGGGAGGGAAGTTCAACAAGATGGGTTTTTGGTGTACCATAATATGAAAGTGCCTGACTTTGCAACCAGATCAGATGGTGATCAAACCAAATGCGGAACAGATTGCTTAGCAAATTGCTCTTGCTTGGCATATGCATATGATTCTTATATTGGTTGCATGTATTGGAGTAGGGACCTAATTGATTTGCAGAAATTTCCATATGGAGGAGTTGACCTCTTCATTCGTCTACCGGCACAACTTCTAGCTACTGGTAAAAAGGGAAATTACAAGGCATTAATAATTGCCATTACTGGGGCAATTGGAGCATTAACAATAGCTATCTGTTCTTATCTTTTGTGGCGGAAATTTACTCCTAAGAGTACAGGAAGTCAGCCTCAAAATTTGATTACCGGAGACCAAAAACAAATTAATAAACTGGAAGAGCTGCCACTATTTGAATTTGAAAAGCTAGCAACTGCTACAAACAATTTTCACTTAGCAAATGTGCTTGGTAAGGGAGGTTTTGGTCCAGTATACAAGGGACAACTGGAAAACGGACAAGAAATTGCTGTGAAGAGACTTTCAAAAACATCTGGACAAGGATTGGAAGAACTCATGAATGAAGTAGTAGTGATTTCTAAACTTCAACATCGCAATCTAGTAAAACTTCTTGGTTGTTGCATAGAACGAGATGAGCAGATGTTAGTCTATGAGTTTATGCCAAATAAAAGTCTGGATTCGTTTCTCTTTGATCCACTACAAAGGAAAGTTCTAGACTGGAAAAAACGCTTCAACATAATTGAAGGAATAGCTCGAGGAATCCTTTATCTTCATAGAGATTCAAGACTAAGGATTATACATAGAGATCTTAAAGCAAGCAACATTTTATTAGATGATGAGATGAATCCAAAAATATCAGACTTTGGTTTAGCCAGAATTGTTAGAGGTGGTAATGATGATGAAGCTAACACAAGAAGGGTCGTCGGAACTTATGGTTATATGCCGCCTGAATATGCAATGGAGGGACTTTTCTCAGAAAAATCAGATGCATGGAAACTATGGAATGAAGGCACCATTATGTCTATAATAGATCCAGAGATACAAGATCGAAGTTTCGAAAAGAGTATGTTGAGGTGTATCCATATAGGACTTCTATGTGTGCAAGAACTTACAAAAGAAAGACCATCTATATCCACTGTGGTTTTGATGCTTATAAGTGAAATTACACATCTTCCTCCTCCAAGGCAAGTTGCTTTCGTTCAAAAACAAAGTTGCCAAAGTTTAGAGTCTTCTCAAAAAAGTCAATATAGCTCAAACAACAATGTAACTCTAAGTGAAGTCCAAGGCAGATAA 2535 0.3933 MQMKSTRLKRVSWCTTHKFNTNFNVIFGGNMESTSSNPKEHHHPKNTKIPPTFKTIRFMGFLTHINYLLIYFLIFSIFYLGVSSVNDTITSTDFIRDPNTISSTNGDLKLGFFSPEKSTHRYVAIWFLSESNIIWIANRDQPLNDSSGVFKIHKDGNLVVLNGQNHVLWSTNVSINATNTTAQLDDSGNLILRDDTSGTPIWDSFTHPAGIAVPQMKIAANRITGKKIEYVSWKSSSDPSSGYFTGSLERLDAPEVFFWYNKTTPYWRTGPWNGRVFLGSPRMLTEYLYGWRLEPNDNGTAYLTYNFENPSMFGILTITPSGTLKLVEFMNKKQFLELEVDQNECDLYGKCGPFGSCDNSTLPICSCLEGFEARNPEEWNRKNWTGGCVRNVPLNCENVKNGREVQQDGFLVYHNMKVPDFATRSDGDQTKCGTDCLANCSCLAYAYDSYIGCMYWSRDLIDLQKFPYGGVDLFIRLPAQLLATGKKGNYKALIIAITGAIGALTIAICSYLLWRKFTPKSTGSQPQNLITGDQKQINKLEELPLFEFEKLATATNNFHLANVLGKGGFGPVYKGQLENGQEIAVKRLSKTSGQGLEELMNEVVVISKLQHRNLVKLLGCCIERDEQMLVYEFMPNKSLDSFLFDPLQRKVLDWKKRFNIIEGIARGILYLHRDSRLRIIHRDLKASNILLDDEMNPKISDFGLARIVRGGNDDEANTRRVVGTYGYMPPEYAMEGLFSEKSDAWKLWNEGTIMSIIDPEIQDRSFEKSMLRCIHIGLLCVQELTKERPSISTVVLMLISEITHLPPPRQVAFVQKQSCQSLESSQKSQYSSNNNVTLSEVQGR 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10104g00003 844 SMART blect_4 92 208 IPR001480 -
Mupr10104g00003 844 Gene3D Phosphorylase Kinase; domain 1 532 633 - -
Mupr10104g00003 844 Pfam PAN-like domain 405 463 IPR003609 -
Mupr10104g00003 844 FunFam receptor-like serine/threonine-protein kinase SD1-8 531 633 - -
Mupr10104g00003 844 CDD B_lectin 92 208 IPR001480 -
Mupr10104g00003 844 ProSiteProfiles EGF-like domain profile. 341 377 IPR000742 -
Mupr10104g00003 844 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 634 726 - -
Mupr10104g00003 844 PIRSF SRK 58 744 IPR024171 GO:0004674
Mupr10104g00003 844 PIRSF SRK 743 844 IPR024171 GO:0004674
Mupr10104g00003 844 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 82 205 - -
Mupr10104g00003 844 SMART ntp_6 405 477 IPR003609 -
Mupr10104g00003 844 ProSitePatterns Serine/Threonine protein kinases active-site signature. 679 691 IPR008271 GO:0004672|GO:0006468
Mupr10104g00003 844 SUPERFAMILY Protein kinase-like (PK-like) 542 821 IPR011009 -
Mupr10104g00003 844 ProSiteProfiles PAN/Apple domain profile. 396 478 IPR003609 -
Mupr10104g00003 844 Pfam D-mannose binding lectin 133 234 IPR001480 -
Mupr10104g00003 844 ProSiteProfiles Bulb-type lectin domain profile. 86 205 IPR001480 -
Mupr10104g00003 844 Pfam S-locus glycoprotein domain 267 374 IPR000858 GO:0048544
Mupr10104g00003 844 CDD EGF_CA 341 375 - -
Mupr10104g00003 844 SUPERFAMILY alpha-D-mannose-specific plant lectins 124 239 IPR036426 -
Mupr10104g00003 844 ProSiteProfiles Protein kinase domain profile. 558 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr10104g00003 844 Pfam Protein tyrosine and serine/threonine kinase 559 745 IPR001245 GO:0004672|GO:0006468
Mupr10104g00003 844 CDD PAN_AP_plant 392 478 - -
Mupr10104g00003 844 MobiDBLite consensus disorder prediction 824 844 - -
Mupr10104g00003 844 SMART serkin_6 558 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr10104g00003 844 Gene3D Transferase(Phosphotransferase) domain 1 746 805 - -
Mupr10104g00003 844 Gene3D Transferase(Phosphotransferase) domain 1 634 745 - -
Mupr10104g00003 844 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 72 790 - -
Mupr10104g00003 844 Gene3D - 81 207 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10104g00003 Mupr-Chr10104 16976 25121 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10104g00003 546 844 Receptor kinase-like Gene Family AT4G11530 49.704 1.06e-103 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr10104g00003 PK_Tyr_Ser-Thr 8.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10104g00003 - - ccaj:109790907 1373.61