Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10096g00005 ATGCACCCATTGGGACCCGCGAATGTCTCACGACCGTTGGCGACATCCTCGAAAATCCTCCGCAGATCTCGCAGCAGAGAGAGAGAGAAAAAAAAGGGTCGGATTTTCTTGCACCTCGCGTTGGGGGGAAGAGAGAGAGAGAACCCAAAAGGAAGGAGCGAGCGAAAAGCAACAAAGCCTCCACTTTTCCTCCTTAGACGATGCTTCCGTTTCTGGCTTCGGTTACCTCGGAGGCGGATTCACGACCCGCTTCCGAGCCGGGTCGGACCCGCCAAAATGGGTTGTGTGAGCTCGAAGAAGGCGGCTGCCGGAGCCGCGTCGTCGCCGGCGGGGCCGTACGTGGTGCGGTCGAGTACGCGGAAGCGGAGCAATGCGTTGGAGCGAAAGGGCAGCGTGGAGGAGACGCGGGAGGTGGCGGTGGAACCCGAAGAGATGAAGGAGTGGAACAGGGGAAGCTTGAGAGGTTCGTTGTCGCTGACGTTGTCGTATAGGTCTGTGGAGGCTGAGCTGATTGCTGTTGGCTGGCCACCTTGGCTTACCTCTGTTGCTGCCGAAGCCATTCAAGGATGGCTCCCTCTCAAAACTGATTCTTTTGAGAGATTGGATAAGATTGGACAAGGTACATATAGCAGTGTATTCCAAGGACGTGAAGTTGAAAGTGGGAGAATGGTTGCCCTGAAGAAGGTGCGCTTTGACAAATTTCATCCGGATAGCATTAGGTTCATGTCAAGAGAAATAATAATTCTCCGCTCAATGGATCACCCAAACGTCATGAAATTGGAGGGTATAATTACTTCACAACTATCAAATAGCCTATACCTTGTATTTGAATACATGGAGCATGACCTTGCTGGCCTAGTAGCTTCTCCTGACATCAAGTTCACTGACTCACAGATTAAGTGTTACATGAGACAACTATTAAGTGGAATGGAGCATTGTCACCTCCGAGGTATCATGCATCGAGACATTAAAGTTTCTAATATATTAGTGAACAATGAAGGTGTTCTCAAGATAGGAGATTTTGGATTAGCAAATACCCTTAGCCCAAATAGCAAGCAACCCCTAACAAGTCGTGTAGTGACTCTATGGTATCGTCCTCCCGAGCTCTTAATGGGATCAACAAACTATGGAGTTTCGGTGGATCTATGGAGTGTGGGTTGTGTATTTGCTGAACTTTTTCTGGGGAAGCCCATCCTTAAGGGGAGAACTGAGGTTGAACAATTACACAAAATTTTCAAGCTTTGCGGGTGTCCACCTGATGAATTCTGGCAAAAGAATAAGCTTCCTCTGGCCACAATGTTTAAGCCTCAGAGTAATTACGAAAGCTCTCTTTTGGAGAGGTGTAGAGGTTTTCCTGGAACTGCTGTAAGCCTACTCGAGACTTTACTTTCCATTGATCCCTTGAAGCGTGGGACTGCCTCCTCTGCACTCATGTCTGAGTATTTCAGCACCATGCCATATGCTTGTAATCCATCACTCCTTCCAAAGTATCCACCAAGCAAAGAAATGGATGCCAAAAATCGGGAAGATATGCGCAGTCTTGATCTTACACTCAGGAAAAAAAACGGAGTACAAGGTAAAGTGAGAGAGACTGTAACATCAAAAAGGCAAAGACGAGTTCACAGAGTTACCCACGACCCTGTCAATTTCAACAAACCAGATTTGAAAGAGGAAATGCAGAATATTTCTCAAAATGCTGGAATAGATGATGGTAGGGAACATGTTACAAAAGGCAAAGTAGGAGCCATGCATAAAGAGCAATCAAAGCCTTCAAATGATGCAAAGTCAGAAGCTGACCAAGTGGGAAATGATTCCAATGGATACGCTGTATACTCAGGACCAGCACCAGTTTCAGGATCTAGTGGCTTTACATGGGCTAAAAGGAGAAAACCAGAAGCTTCATCCATATTGTCTGATGGCTCAAGAAGCAAAATCAGTTCTCTGGATCCAACCTTTGCAAAAGGCACGTATGATCTAACAAAACATGGGATAGAAGTTTCAGAAAGGAAACATAGTTACAACACAATGGATGAGACTTCCAACTACATATTGCAAAATTACCAGGCTTCTCGCGTTCAACAAAAATCATTCGATGTAGCTGATACATTCCAGTACCAGTCAAATTGTTACATGGAATTTGATTTCACAGATAAAATGGATTCTCTGATAGATACTCGGGGCCACAGAAAACATGGTGAGCCTGTGGAGCAATCAATGCAAAAAATGATCCCGTCAAATAAAGATGATGAGTTGTTGCATTGGAATGAAAATAATAATCCGCAATCTCTTCGTAAATCAAGGTTGGGAAGAGTAACAAATTACAATGGCCACATGGAAGGTGATGTAACAAAGAAAGCTTAA 2361 0.4524 MHPLGPANVSRPLATSSKILRRSRSREREKKKGRIFLHLALGGRERENPKGRSERKATKPPLFLLRRCFRFWLRLPRRRIHDPLPSRVGPAKMGCVSSKKAAAGAASSPAGPYVVRSSTRKRSNALERKGSVEETREVAVEPEEMKEWNRGSLRGSLSLTLSYRSVEAELIAVGWPPWLTSVAAEAIQGWLPLKTDSFERLDKIGQGTYSSVFQGREVESGRMVALKKVRFDKFHPDSIRFMSREIIILRSMDHPNVMKLEGIITSQLSNSLYLVFEYMEHDLAGLVASPDIKFTDSQIKCYMRQLLSGMEHCHLRGIMHRDIKVSNILVNNEGVLKIGDFGLANTLSPNSKQPLTSRVVTLWYRPPELLMGSTNYGVSVDLWSVGCVFAELFLGKPILKGRTEVEQLHKIFKLCGCPPDEFWQKNKLPLATMFKPQSNYESSLLERCRGFPGTAVSLLETLLSIDPLKRGTASSALMSEYFSTMPYACNPSLLPKYPPSKEMDAKNREDMRSLDLTLRKKNGVQGKVRETVTSKRQRRVHRVTHDPVNFNKPDLKEEMQNISQNAGIDDGREHVTKGKVGAMHKEQSKPSNDAKSEADQVGNDSNGYAVYSGPAPVSGSSGFTWAKRRKPEASSILSDGSRSKISSLDPTFAKGTYDLTKHGIEVSERKHSYNTMDETSNYILQNYQASRVQQKSFDVADTFQYQSNCYMEFDFTDKMDSLIDTRGHRKHGEPVEQSMQKMIPSNKDDELLHWNENNNPQSLRKSRLGRVTNYNGHMEGDVTKKA 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10096g00005 786 ProSiteProfiles Protein kinase domain profile. 198 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr10096g00005 786 CDD STKc_CDK9_like 198 482 - -
Mupr10096g00005 786 MobiDBLite consensus disorder prediction 1 33 - -
Mupr10096g00005 786 Gene3D Transferase(Phosphotransferase) domain 1 281 519 - -
Mupr10096g00005 786 PANTHER CELL DIVISION PROTEIN KINASE 196 485 - -
Mupr10096g00005 786 ProSitePatterns Protein kinases ATP-binding region signature. 204 227 IPR017441 GO:0005524
Mupr10096g00005 786 ProSitePatterns Serine/Threonine protein kinases active-site signature. 318 330 IPR008271 GO:0004672|GO:0006468
Mupr10096g00005 786 SUPERFAMILY Protein kinase-like (PK-like) 192 488 IPR011009 -
Mupr10096g00005 786 MobiDBLite consensus disorder prediction 757 786 - -
Mupr10096g00005 786 Gene3D Phosphorylase Kinase; domain 1 185 280 - -
Mupr10096g00005 786 SMART serkin_6 198 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr10096g00005 786 FunFam probable serine/threonine-protein kinase At1g54610 185 280 - -
Mupr10096g00005 786 FunFam probable serine/threonine-protein kinase At1g54610 281 522 - -
Mupr10096g00005 786 MobiDBLite consensus disorder prediction 580 613 - -
Mupr10096g00005 786 Pfam Protein kinase domain 198 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr10096g00005 786 MobiDBLite consensus disorder prediction 39 58 - -
Mupr10096g00005 786 MobiDBLite consensus disorder prediction 105 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10096g00005 Mupr-Chr10096 27983 34145 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10096g00005 190 525 Core Cell Cycle Gene Families AT5G10270 44.444 8.35e-100 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mupr10096g00005 Pkinase 9.9e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10096g00005 - - gmx:100781059 1058.13