Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10096g00002 ATGGAAAAACTTGCCCCTCTTGAAGAGGCCCTTTTGAATGGTGACTCTAGTGTAAGCAACAGTTCTGATCCCAGTAAGACCAGAGGAAATGAAAATTTAACCTGCTATTCAAATGCTGGATTTTTCAGCATTCTTACTTTCTCATGGATCAGTCCACTACTAAGTCTTGGCAATGAGAAGACTTTAGATCATGAGGACCTCCCACTGCTTGCCACTGATGACAGTGCCTACGGGGCCTTCACAACTTTTAGAAACAAGCTCGAGTCTGAGTGTGGTAGTGTTAGGAGAGTGACCACTCTCAAGCTGGTGAAAGTGTTAATCTTCTCAACATGGCAAGGGATCCTTTTATCTGGTTTGTTAGCATTCTTATGCACCTGTGCTTCTTATGTTGCACCCTATCTTATTGAAATCCTTGTTCAATACTTCAACCAGGAACACAAGTTTAAAAATGAAGGCTATATGTTGGCTATGGCATTTGTTGCTGCAAAGTTTGTGGAGTGTCTTTCACAGAGACACTGGATGTTTAAATTGCAGCAGGTTGGAGTAAGGATGCAATCAATGTTGGTGTCAATGATCTATGCTAAAGGTTTGACTCTTTCATTTCAATCAAGGGAAGGTTACAGCAGTGGGGAAATCATCAACTTAATGTCTGTGGATGCTGCAAGGGTCAGTGCACTTTGTTGGTACATGCATGCTCCATGGATATGTGTTCTGCAAGTTGCTTTGGCCTTGTTAATTCTCTATAGAAATGTCGGGGTGGCTTCAATAGCTTCTTTTGCTGCCACTGTAATTGTGATGTTGCTAAACCTTCCTGTGGCATCATTGCAAGAAAAGTTCCAAGGTAAGATAATGGAGTTCAAAGATAAAAGAATGAAGGCGACGTCTGAGATTCTAAAGAGTATGAAGATTCTAAAACTTCAAGCATGGGAGATGAAGTTCTTATCAAAGGTTTTTCAGCTTAGGAATACTGAGGAGATATGGCTAAAGAAATTTCTAGTTAGCACAGCTACTATTAGATTTCTCTTCTTTAATGCCTCAACTTTTATTGCTGTGGTCACTTTCAGTGCTTGTGTTCTTATAGGCATCCCACTTGAATCAGGGAAAATCTTATCCGCACTTACAACATTCGAAATTCTTCAAATGCCCATCTGCAGTCTTCCTGACACAATTTCAATTATTGCACAAACTAAGGTTTCTCTTGATAGAATTACATCATTTCTTTGTCTAGATGACTTGCAGACTGATGTAGTGGAGAAACTTCCACAGGGTAGTTCTGATATAGCAATTGAATTAGCAGACGGAAATTTCTCTTGGGATTTATCTTCGCTCAACACAACATTGAAAAACATAAATCTCAGAGTTTTTCATGGTATGAGGGTTGCTGTTTGTGGTACTGTTGGATCAGGCAAATCTAGTTTACTTTCTTGTATAATAGGTGAAATACCTAAGATATCTGGGACCCTAAAGGTGTGTGGATCAAAGGCTTATGTTTCTCAATCACCATGGATACAGAGTGGCAAAATAGAAGAGAACATATTATTTGGTAAAGAGATGGACAAGGAAAAGTATGAGAAGGTACTAGAAGCATGTTCCTTGACAAAAGACCTAGAGATTCTACCATTTGGTGATCAGACCATTATTGGAGAGAAGGGAATCAACTTGAGTGGTGGACAGAAGCAAAGAGTACAAATAGCCCGTGCACTTTACCAAGATGCTGACATTTATTTGTTTGATGATCCCTTCAGTGCTGTTGATGCTCATACAGGATCTCATCTCTTTAGGGAGTGTTTGCTTGGCCTTCTAAAAACAAAAACTGTGATATACATAACTCATCAAGTAGAATTCTTACCTGATGCTGATCTAATATTGGTCATGAGGGAAGGAAAGATAACTCAATCAGGAAAATACAATGACATTCTCAGGTCAGACACTGATTTTATGGAACTTGTAGATGCACATAGAACAGCTTTGTCTTCAGTTATGTCCTCAGAGAGAAGGCCCACATTTAAAACATTAGGTATCACCACAAAGGACACAGATTCACTAAGTGATTTTGAACTCGAGAAAAAAGTGAAAAGCATAGATGATCTCAATGATAAATCAAATGACACAGTTGAGCCAAAAGGTCAACTTGTTCAAGATGAAGAACGGGAAAAGGGTAGAGTTGGGTTTAAGGTCTACTGGAAATACATAACAACAGCTTATGGAGGAGCTTTTGTACCCTTCATATTACTCTCACAGACACTCACCATGGTTTTTCAGATTGGAAGCGATTATTGGATGGCTTTAGAAACTCCTGTTTCTGCAACAGCAGAAACTGATATTGAAAGCTTTACACTAATGGTTGTCTATGTTGCTTTAGCGGTTGGAAGTTCCTTTTTCATCCTTGTCATATCAGTTCTTTCTATGATAGTTGCATACAAGACGTCTACTATGCTCTTCAATAAAATGCATTTGTGTGTTTTCCGAGCACCAATGTCATTTTTTGATGCCACTCCAAGTGGGAGAATCCTTAATAGAGCTTCAACAGATCAAAACACAATAGACATAAGCATTTCAGATATGGTATGGGGAATTACCTTCAGTCTGATTCACCTCTTGGGAAATATTGTTGTCATGTCTCAAGCTGAATGGCAGGTGTTCATAGTATTAATTCCTATCATGGCAGCAGGCATATGGTACCAGCGATACTATTCTGCATCAGCTCGGGAATTGGCGCGATTAGTTGGTACATGCCAAGCTCCAGTTATACAACATTTTTCTGAAACAATTTCTGGATCAACAACCATAAGATGTTTTGAGCATGAATCGAGATTTAATGACATAAATATGAAACTGATAGATAGATGTTCCCAACCCAGATTGTACAGTGCCAGTGCAATGGAATGGCTGAGTTTTAGATTGGATATTTTATCCACTATCGTATTTTCCTTCTGTTTGGTTTTCCTGATATCTTTTCCAAATTCAATTACTGCACCTGGCATCGCGGGATTGGCTGTGACATATGGATATAGTCTAAACGAACTACTATGTAGTTTAATCTGGCATCTTTGCAATTTGGAGAATGGAATTATATCCGTAGAAAGAATACTTCAGTACACCTCCATCCCAAGCGAAGCTCCTCTTGTAATAAAAGGCAGCCAACCACATCATTCTTGGCCATCATTTGGAGAGGTTCATATCCAGGATTTACAGGTTCGATATGCTCCTCATTTGCCTCTTGTTTTGCATGGTCTTACTTGCACTTTTACTGCTGGAGCAAAAACTGGCATTGTGGGAAGAACAGGAAGTGGAAAGTCAACTCTAGTGCTAACACTTTTTCGACTTCTTGAACCTGTTGCTGGACAGATATTGATAGATAGTGTTAACATCTCTTTGATTGGAATTCATGATTTGAGGTCCAGACTAAGCATTATTCCTCAGGATCCAACGATGTTTAAAGGGACTGTACGAAGCAACTTGGACCCCCTTGAAGAATACACAGATGAACAGATTTGGGAGGCTCTAGATATGTGCCAACTTGGAGATGTAGTAAGGAAGAAAGAAGGGAAGCTTGACTCCATAGTTACTGAGAACGGAGAAAATTGGAGTATGGGTCAAAGGCAGTTGGTGTGCCTCGGCCGTGTTCTACTTAAGAAAAGCAAGATATTGGTGCTTGATGAAGCTACTGCCTCAGTTGATACAGCCACAGATAATATTATTCAGCAAACAGTGAAGCAACATTTTTCAGAATGCACAGTCATTACCATTGCTCATAGAATAACTTCAATCCTGGATAGTGACGTGGTTCTTTTTCTAAATCAAGGGCTTATTGAGGAATATGATTCACCCCAGAAACTTCTTCAGAACAAATATTCATCTCTTGCTCTACTAGTTGCAGAATACACAAGGAGGTCAAACTCTGGTTTTGGAAGTTAA 3918 0.3938 MEKLAPLEEALLNGDSSVSNSSDPSKTRGNENLTCYSNAGFFSILTFSWISPLLSLGNEKTLDHEDLPLLATDDSAYGAFTTFRNKLESECGSVRRVTTLKLVKVLIFSTWQGILLSGLLAFLCTCASYVAPYLIEILVQYFNQEHKFKNEGYMLAMAFVAAKFVECLSQRHWMFKLQQVGVRMQSMLVSMIYAKGLTLSFQSREGYSSGEIINLMSVDAARVSALCWYMHAPWICVLQVALALLILYRNVGVASIASFAATVIVMLLNLPVASLQEKFQGKIMEFKDKRMKATSEILKSMKILKLQAWEMKFLSKVFQLRNTEEIWLKKFLVSTATIRFLFFNASTFIAVVTFSACVLIGIPLESGKILSALTTFEILQMPICSLPDTISIIAQTKVSLDRITSFLCLDDLQTDVVEKLPQGSSDIAIELADGNFSWDLSSLNTTLKNINLRVFHGMRVAVCGTVGSGKSSLLSCIIGEIPKISGTLKVCGSKAYVSQSPWIQSGKIEENILFGKEMDKEKYEKVLEACSLTKDLEILPFGDQTIIGEKGINLSGGQKQRVQIARALYQDADIYLFDDPFSAVDAHTGSHLFRECLLGLLKTKTVIYITHQVEFLPDADLILVMREGKITQSGKYNDILRSDTDFMELVDAHRTALSSVMSSERRPTFKTLGITTKDTDSLSDFELEKKVKSIDDLNDKSNDTVEPKGQLVQDEEREKGRVGFKVYWKYITTAYGGAFVPFILLSQTLTMVFQIGSDYWMALETPVSATAETDIESFTLMVVYVALAVGSSFFILVISVLSMIVAYKTSTMLFNKMHLCVFRAPMSFFDATPSGRILNRASTDQNTIDISISDMVWGITFSLIHLLGNIVVMSQAEWQVFIVLIPIMAAGIWYQRYYSASARELARLVGTCQAPVIQHFSETISGSTTIRCFEHESRFNDINMKLIDRCSQPRLYSASAMEWLSFRLDILSTIVFSFCLVFLISFPNSITAPGIAGLAVTYGYSLNELLCSLIWHLCNLENGIISVERILQYTSIPSEAPLVIKGSQPHHSWPSFGEVHIQDLQVRYAPHLPLVLHGLTCTFTAGAKTGIVGRTGSGKSTLVLTLFRLLEPVAGQILIDSVNISLIGIHDLRSRLSIIPQDPTMFKGTVRSNLDPLEEYTDEQIWEALDMCQLGDVVRKKEGKLDSIVTENGENWSMGQRQLVCLGRVLLKKSKILVLDEATASVDTATDNIIQQTVKQHFSECTVITIAHRITSILDSDVVLFLNQGLIEEYDSPQKLLQNKYSSLALLVAEYTRRSNSGFGS 1305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10096g00002 1305 CDD ABC_6TM_ABCC_D1 116 403 IPR044746 GO:0140359
Mupr10096g00002 1305 CDD ABCC_MRP_domain1 429 629 - -
Mupr10096g00002 1305 ProSitePatterns ABC transporters family signature. 554 568 IPR017871 GO:0005524|GO:0016887
Mupr10096g00002 1305 Pfam ABC transporter 1076 1224 IPR003439 GO:0005524
Mupr10096g00002 1305 FunFam ABC transporter C family member 5 414 661 - -
Mupr10096g00002 1305 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 738 1022 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr10096g00002 1305 SUPERFAMILY ABC transporter transmembrane region 108 403 IPR036640 GO:0005524|GO:0016020
Mupr10096g00002 1305 SUPERFAMILY ABC transporter transmembrane region 742 1041 IPR036640 GO:0005524|GO:0016020
Mupr10096g00002 1305 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 426 651 IPR027417 -
Mupr10096g00002 1305 Pfam ABC transporter 447 581 IPR003439 GO:0005524
Mupr10096g00002 1305 CDD ABCC_MRP_domain2 1057 1277 - -
Mupr10096g00002 1305 FunFam ABC transporter C family member 10 98 411 - -
Mupr10096g00002 1305 CDD ABC_6TM_ABCC_D2 740 1034 IPR044726 GO:0140359
Mupr10096g00002 1305 FunFam ABC transporter C family member 3 1042 1294 - -
Mupr10096g00002 1305 Gene3D ABC transporter type 1, transmembrane domain 86 410 IPR036640 GO:0005524|GO:0016020
Mupr10096g00002 1305 Gene3D ABC transporter type 1, transmembrane domain 704 1040 IPR036640 GO:0005524|GO:0016020
Mupr10096g00002 1305 Gene3D - 1043 1293 IPR027417 -
Mupr10096g00002 1305 SMART AAA_5 1085 1270 IPR003593 GO:0016887
Mupr10096g00002 1305 SMART AAA_5 456 631 IPR003593 GO:0016887
Mupr10096g00002 1305 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 115 395 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr10096g00002 1305 FunFam ABC transporter C family member 5 703 1040 - -
Mupr10096g00002 1305 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1049 1284 IPR027417 -
Mupr10096g00002 1305 Gene3D - 411 670 IPR027417 -
Mupr10096g00002 1305 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 429 652 IPR003439 GO:0005524
Mupr10096g00002 1305 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 37 1292 - -
Mupr10096g00002 1305 Pfam ABC transporter transmembrane region 743 984 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr10096g00002 1305 Pfam ABC transporter transmembrane region 115 382 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr10096g00002 1305 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1059 1293 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10096g00002 Mupr-Chr10096 11617 19327 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10096g00002 429 856 Calmodulin-binding Proteins AT2G36910 25.726 3.02e-27 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10096g00002 - K05666 gmx:100795627 2244.16