Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10088g00004 GCAGTTAGACAGAGAGAGAATAGAAAAAAAAAAATTGAAAGAATATATTTTCTTTCTTTGCTTGACAATATTATAATCGATAACTTTTTTCTGCTTGTCCCAGCCTCATACTCTCTTTATATAAATTGTGGTGGAAGGATGACAACAGCCAATAGAAGCACATATGAGGATGATTTATATGGAGGAGGTCCAACTAGTTTTCTTCATAATGGAACAAGAAATTGGGCATTGATCACTACTGGCACCTTCATGGATAAAGAATTTGAACGAGACTACTATACTGCATCAAATAAGTCTTTGCTTTCCATGGACAATGCTGATCTGTACATGAATGCACGAGTTTCTCCCACTTCTCTGACTTATTATGCATTTTGCCTGGAAAATGGATACCACACAGTATCACTATATTTTGCGGAAATCATGTTCACTGATGATCAAACATATAACAGCCTAGGAAGGCGAGTATTTGACATCTACATTCAGAGAGAGCGGGTCGAGGAGGACTTCAATATTGTAGAAGCAGCAGGAGGAGCTGGTAAGGCAGTCACAAAATCATACAATGCTCATGTAACTAGTAATACCTTGGAGATTCGCTTGTATTGGGCTGGAAAAGGGACAACTAGTCTCCCATTTAGATCAGTATATGGTCCTCTTATATCAGCTATATCTGTTGAATATGTTAACTTTACACCTCTCCCGGAAAACGGAAGTAGCACATCTGTGGGCACATCTGCGGGTACATCTTTAGGCATATCTGCAGGAGGTTTGGCTGGAATTGTGGCTACAGGAGCAGTTGTTATCATCCTTGTATTTGGTATACTTTGGTGGCAAGGCTGTTTAGGAAAGAAAAGTTCTTTAGAGAAAGAGCTAAAGGGTATAGAACTGCGAACCGGTTTATTTACTTTAAGACAAATCAAAACTGCAACAAACAATTTTGATGTTGCCAATCAAATTGGACAAGGAGGATTTGGTCCTGTGTACAAGGGATGTCTATCAAATGGATCATTAATAGCAGTCAAGCAGCTTTCTTCTGAATCAAGACAAGGGAATCGTGAGTTTTTAAATGAGATAGGCATGATTTCTGCTTTGCAGCATCCTCATCTTGTTAAACTCTATGGATGTTGTGTTGAGGGAGATCAACTATTGCTGGTATATGAATATATGGAAAACAATAGCCTTGCTCGTGCTTTATTTGGCCTCGAAAAACACCAAATAAAATTGAACTGGCCAACAAGATACAAGATCTGTGTTGGTATTGCTAGAGGTTTGGCATACCTCCATGAAGAATCAAGACTAAAGGTTGTTCATAGGGATATCAAGGCCACTAATGTGCTGCTTGATAAAGATCTCAACCCAAAGATATCTGACTTTGGTTTGGCCAAGCTTGATGAACAGGATAACACTCATATTAGCACCAGAATAGCTGGGACATTTGGATATATGGCTCCTGAATATGCCATGCACGGTTATCTAACCGATAAAGCAGATGTCTATAGCTTTGGAATTGTTGTATTGGAAATTATAAATGGAAGAAACAATACCATTCACCGACAAAATGAAGAATCATTCTCTATTCTTGAATGGGCACATCTGTTGAAAGAGAAAGGTGATTTAATAGAGCTAGTTGATAGAAGATTGGGTTCAGAGTTCAACAAAGAGGAGGTATTGGTGATGATCAAGGTGGCTCTCTTATGCACTAATGTGACTGCAACACTTAGGCCAACCATGTCATCAGTGGTAAGCATGCTAGAAGGAAGAACTGTTGTTGAGGATGTGGTTTCTGAGGCAAGTGAGGTATTGGATGAGAAGAAGTTGGAGAAAATTAGACAGTATTACCATGACCTGAGTATCTCAACGGAAGAGCTATAG 1869 0.3906 AVRQRENRKKKIERIYFLSLLDNIIIDNFFLLVPASYSLYINCGGRMTTANRSTYEDDLYGGGPTSFLHNGTRNWALITTGTFMDKEFERDYYTASNKSLLSMDNADLYMNARVSPTSLTYYAFCLENGYHTVSLYFAEIMFTDDQTYNSLGRRVFDIYIQRERVEEDFNIVEAAGGAGKAVTKSYNAHVTSNTLEIRLYWAGKGTTSLPFRSVYGPLISAISVEYVNFTPLPENGSSTSVGTSAGTSLGISAGGLAGIVATGAVVIILVFGILWWQGCLGKKSSLEKELKGIELRTGLFTLRQIKTATNNFDVANQIGQGGFGPVYKGCLSNGSLIAVKQLSSESRQGNREFLNEIGMISALQHPHLVKLYGCCVEGDQLLLVYEYMENNSLARALFGLEKHQIKLNWPTRYKICVGIARGLAYLHEESRLKVVHRDIKATNVLLDKDLNPKISDFGLAKLDEQDNTHISTRIAGTFGYMAPEYAMHGYLTDKADVYSFGIVVLEIINGRNNTIHRQNEESFSILEWAHLLKEKGDLIELVDRRLGSEFNKEEVLVMIKVALLCTNVTATLRPTMSSVVSMLEGRTVVEDVVSEASEVLDEKKLEKIRQYYHDLSISTEEL 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10088g00004 622 Gene3D - 35 226 - -
Mupr10088g00004 622 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 77 611 - -
Mupr10088g00004 622 ProSiteProfiles Protein kinase domain profile. 312 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr10088g00004 622 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 36 227 - -
Mupr10088g00004 622 SUPERFAMILY Protein kinase-like (PK-like) 296 589 IPR011009 -
Mupr10088g00004 622 Gene3D Transferase(Phosphotransferase) domain 1 388 600 - -
Mupr10088g00004 622 Gene3D Phosphorylase Kinase; domain 1 280 387 - -
Mupr10088g00004 622 SMART serkin_6 312 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr10088g00004 622 Pfam Malectin domain 38 222 IPR021720 -
Mupr10088g00004 622 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 281 387 - -
Mupr10088g00004 622 FunFam Putative LRR receptor-like serine/threonine-protein kinase 388 595 - -
Mupr10088g00004 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 434 446 IPR008271 GO:0004672|GO:0006468
Mupr10088g00004 622 Pfam Protein tyrosine and serine/threonine kinase 314 582 IPR001245 GO:0004672|GO:0006468
Mupr10088g00004 622 CDD STKc_IRAK 318 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10088g00004 Mupr-Chr10088 14214 17885 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10088g00004 34 613 Receptor kinase-like Gene Family AT1G53420 57.483 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr10088g00004 PK_Tyr_Ser-Thr 6.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10088g00004 - - gmx:732563 896.73