Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10060g00003 ATGGCAGATGATCAATTTCAGGCAAGTGGGAACTGGTGGGACACGGCAAGAAACGTGAGGTTTGAAAGCGGGGCATCACAGTCATCTTCATCTGCCATCACCAACATAGGCAACTTTGGTTGGCAACCTTCAGATATGGGAGACATGAAGCCAAGGTCTTCCATGGATTCTTCTTCTGTGGTTTTCCATGACACACAGAATAAGCTTCAACCCCCAGATTCTGCCACTTCCACTGATCCCAACTTGCATATGATGGGTCTAGGCCTTTCATCCCAACCCATGGATTGGAATCAAGCATCTTTGTTAAGAGGAGAGAAGGGAACAGAGAACAGTTTCCGATCGATGTTGCAAGAGAATTTGAGTTCATCAAGAACCAATTTTGAGCAAGAAAGTGGGATGGGGTTGTCTCAACAAGTTCAATGGAGGTCAGAGAAGATGTTCTCTGCAGATCAGTCTTCAAGTAATGAGTTCAAGCAAGTGAATAGGGGTTTCTCTTTGGATCAAAGCCAGTTTAGTCCTCAATATAGTTCTGGGGACAGTACAGTGACAAGCCAAGGGTTACCCTCTTCTAATTTTCAGATGGATTCCTCAGCCCTATATGGGACCCCTTCAATATTGCAAGGACTATTGGGACATGACAATAACCCACCTCAACAACAACCTTCTTCCATAAGCTTTCCATACCCAACAAGCTATGGATTAAACTCTAATGAGTTGGTGCCTTCTTGGTCCAAAGTTCCTCAATTCTTGAGAGCTTCACCTCCAAAACAACCACCCAATAACCAGTTGCATTTCACTAACAACGCACCCTTTTGGAACGCTTCTGAGGTTGCAAACGTCAAAGATGTTCGGTCCAGCTTCTTGCAACCCCCCTTCTCTACGCCAAATTTTGAAGTACAGTCAAAGAATATATCTGAAGTTAGGGATTCGGGTACTGTGGTAAAGAAAAGTGGGAATGAGCCAGCACCCAAAAGGACCCGTAACGAAACACCATCTCCTATGCCAGCTTTTAAGGTGAGAAAAGAGAAGATGGGGGACAGAATCACTGCACTCCAACAATTGGTGTCGCCTTTCGGAAAGACGGATACAGCCTCAGTGCTCTCTGAAGCCATTGAATACATCAAATTCCTCCACGAACAGGTCACTGCTTTAAGTACCCCGTATATGAAAAGTGGAGCTCCAATACAGATTCAACAGAGTTCTGGTAAATCTAAGGAAGCTGAGGGTCCAAGGCAGGATCTTAGAAGCCGAGGGCTATGCTTGGTGCCGGTTTCGAGTACATTTCCAGTGACTCATGAAACCACAGTTGATTTTTGGACACCAACATTCGGAGGAACTTCCAGATAA 1347 0.4506 MADDQFQASGNWWDTARNVRFESGASQSSSSAITNIGNFGWQPSDMGDMKPRSSMDSSSVVFHDTQNKLQPPDSATSTDPNLHMMGLGLSSQPMDWNQASLLRGEKGTENSFRSMLQENLSSSRTNFEQESGMGLSQQVQWRSEKMFSADQSSSNEFKQVNRGFSLDQSQFSPQYSSGDSTVTSQGLPSSNFQMDSSALYGTPSILQGLLGHDNNPPQQQPSSISFPYPTSYGLNSNELVPSWSKVPQFLRASPPKQPPNNQLHFTNNAPFWNASEVANVKDVRSSFLQPPFSTPNFEVQSKNISEVRDSGTVVKKSGNEPAPKRTRNETPSPMPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTALSTPYMKSGAPIQIQQSSGKSKEAEGPRQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGGTSR 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10060g00003 448 MobiDBLite consensus disorder prediction 23 58 - -
Mupr10060g00003 448 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 123 429 - -
Mupr10060g00003 448 MobiDBLite consensus disorder prediction 119 154 - -
Mupr10060g00003 448 MobiDBLite consensus disorder prediction 168 228 - -
Mupr10060g00003 448 SMART finulus 339 383 IPR011598 GO:0046983
Mupr10060g00003 448 MobiDBLite consensus disorder prediction 394 414 - -
Mupr10060g00003 448 Gene3D - 338 396 IPR036638 GO:0046983
Mupr10060g00003 448 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 328 377 IPR011598 GO:0046983
Mupr10060g00003 448 CDD bHLH_AtbHLH_like 334 385 IPR045239 -
Mupr10060g00003 448 FunFam Transcription factor bHLH123 family 338 400 - -
Mupr10060g00003 448 MobiDBLite consensus disorder prediction 309 335 - -
Mupr10060g00003 448 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 338 393 IPR036638 GO:0046983
Mupr10060g00003 448 MobiDBLite consensus disorder prediction 23 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10060g00003 Mupr-Chr10060 42013 45159 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10060g00003 103 448 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 47.595 2.50e-79 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10060g00003 - - gmx:100778697 780.015