Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10046g00001 GATCGTGATTGTATAATAATAAAGCGTGCACATAAGAGGATCGTGGACTGGGAAGCGAATTCTGCATTTGCTTGTGGTAAGAGCAAAGTCACAATTTCTGCAACTATGAGAACTTCATGGGCGGATTCTGCTGACAATTCAAGCAATACCAATGCCTCGGCGGGCCCTCCCCGGGCAGCATACGTGCCTCCGCATCTTCGCAACCGGACATTGTCGTCGGAGGTTCCTGTTCCTGCGGCGGCAGCACACTCGACGGCTTCTTTGCCGGCGGTGAATGACCGGGTGAATCATGGTGGTCCAATTCCTCAGCAGGGTGGTTACTATAAAGCTGATAACGGGCGACAACAAGGATATGGTTATAATTTTCAGAGTGGTGGTGGTGGTGGCTGGAATGGTAGAGGGGCAGGGAGGGACCGTGGGAGGCGCGAGGTGAACCCTTTTGAGAATGATGAAGCTGCGGATCAATCTTTTAGTGAGCAAGAGAACACGGGGATTAACTTTGAGGCCTATGATGATATCCCAGTGGAGACTAGTGGGGAGAATGTGCCCCCGCCTGCGAATACATTTGCCGAAATAGATTTGGGTGATGCATTGAATCAGAATATACAGAGATGCAAGTATGTGAAACCAACCCCAGTTCAGAGGTATGCCATTCCAATTTCTATTTCGGGGCGAGATTTGATGGCCTGTGCTCAGACTGGGTCAGGAAAGACTGCTGCATTTTGCTTTCCTATTATAAGTGGAATCATGAGGGAGCAATATGTTCAAAGACCACATGTAGCACGAACTGCTTTTCCTCTGGCACTTATCCTCTCCCCTACGCGGGAGCTTTCATGTCAGATACATGATGAGGCCAAAAAGTTTTCTTATCAAACAGGTGTCAAAGTGGTGGTTGCTTATGGAGGAGCACCAATCACCCAACAGTTACGGGAGCTTGAGAGAGGCGTTGATATTCTGGTGGCAACTCCAGGACGATTGGTGGATTTGCTTGAGAGGGCTAGGGTGTCATTGCAGATGATAAGATATTTAGCTCTTGATGAGGCAGATCGGATGCTGGATATGGGTTTTGAGCCTCAAATAAGAAAGATAGTTGAACAAATGGACATGCCTCCCCCGGGCATTAGACAGACACTGCTGTTTAGTGCCACATTTCCCAAAGAGATACAGAGACTTGCATCGGATTTTCTCTCAAGTTATGTGTTTCTGGCTGTTGGAAGAGTTGGCTCAAGTACTGACCTAATTGCTCAAAGAGTAGAATATGTGCTTGAGTCAGACAAGAGAAGCCACCTCATGGACCTTCTTCATGCTCAGAGGGAAAATGGAATTGATGGCAAGCAAGGTCTAACATTAGTTTTTGTGGAAACAAAGAAAGGAGCTGATGCGTTGGAACACTGCTTGTGTGTTAATGGATTTCCAGCCGCTAGCATTCATGGTGACAGAACACAACAAGAAAGAGAACTAGCATTGAGGTCGTTCAAGACTGGAAACACACCAATTCTAGTGGCAACAGATGTTGCAGCACGTGGTCTTGACATCCCGCGGGTAGCACATGTGGTAAATTTTGATCTTCCCAATGACATTGATGATTATGTGCACCGGATAGGAAGAACAGGGCGAGCTGGTAAAATGGGATTAGCAACGGCCTTCTTCAATGAAAGTAATTTGTCCTTGGCTAAACCATTGGCTGATCTGATGCAAGAGGCAAATCAAGAAGTACCTGCCTGGCTCACCCGTTATGCAGCAAGGGCTGCTTACGGCGGTGGCGGCAGAAATAGGAGGTCAGGGGGGGGATCCCGTTTTGGTGGCCGCGATTTTAGGAGAGACGGATCAAATAATAAAGGATCAGATTACTATGGCGGAACTGGTGGTGGACATGGCAATTATGGTGGAGGGTACGGTCAAGGCATGTCAATGGTGAAAAGCTGTATCTTCTCAACCTTGGTTTGCCTGAATCCATGCAATTCCATACTACTGGAAATCTTTTATCATAGGAAAGATTTACAATTGGCTTGGTTTTGC 2019 0.472 DRDCIIIKRAHKRIVDWEANSAFACGKSKVTISATMRTSWADSADNSSNTNASAGPPRAAYVPPHLRNRTLSSEVPVPAAAAHSTASLPAVNDRVNHGGPIPQQGGYYKADNGRQQGYGYNFQSGGGGGWNGRGAGRDRGRREVNPFENDEAADQSFSEQENTGINFEAYDDIPVETSGENVPPPANTFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISISGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPHVARTAFPLALILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPITQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGIRQTLLFSATFPKEIQRLASDFLSSYVFLAVGRVGSSTDLIAQRVEYVLESDKRSHLMDLLHAQRENGIDGKQGLTLVFVETKKGADALEHCLCVNGFPAASIHGDRTQQERELALRSFKTGNTPILVATDVAARGLDIPRVAHVVNFDLPNDIDDYVHRIGRTGRAGKMGLATAFFNESNLSLAKPLADLMQEANQEVPAWLTRYAARAAYGGGGRNRRSGGGSRFGGRDFRRDGSNNKGSDYYGGTGGGHGNYGGGYGQGMSMVKSCIFSTLVCLNPCNSILLEIFYHRKDLQLAWFC 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10046g00001 673 MobiDBLite consensus disorder prediction 41 62 - -
Mupr10046g00001 673 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 267 556 IPR027417 -
Mupr10046g00001 673 CDD SF2_C_DEAD 414 550 - -
Mupr10046g00001 673 MobiDBLite consensus disorder prediction 41 55 - -
Mupr10046g00001 673 MobiDBLite consensus disorder prediction 84 159 - -
Mupr10046g00001 673 FunFam ATP-dependent RNA helicase RhlB 405 584 - -
Mupr10046g00001 673 MobiDBLite consensus disorder prediction 587 613 - -
Mupr10046g00001 673 Gene3D - 142 404 IPR027417 -
Mupr10046g00001 673 SMART helicmild6 460 541 IPR001650 -
Mupr10046g00001 673 Pfam DEAD/DEAH box helicase 211 391 IPR011545 GO:0003676|GO:0005524
Mupr10046g00001 673 FunFam Probable ATP-dependent RNA helicase DDX4 150 404 - -
Mupr10046g00001 673 Pfam Helicase conserved C-terminal domain 426 541 IPR001650 -
Mupr10046g00001 673 CDD DEADc_DDX3_DDX4 188 408 IPR044763 GO:0003724|GO:0005524
Mupr10046g00001 673 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 218 402 IPR014001 -
Mupr10046g00001 673 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 429 580 IPR001650 -
Mupr10046g00001 673 MobiDBLite consensus disorder prediction 135 149 - -
Mupr10046g00001 673 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 157 580 - -
Mupr10046g00001 673 MobiDBLite consensus disorder prediction 597 611 - -
Mupr10046g00001 673 Gene3D - 405 584 IPR027417 -
Mupr10046g00001 673 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 187 215 IPR014014 GO:0003724
Mupr10046g00001 673 SMART ultradead3 206 417 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10046g00001 Mupr-Chr10046 2213 8471 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10046g00001 185 573 Eukaryotic Initiation Factors Gene Family AT3G19760 30.711 1.75e-58 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10046g00001 K11594 - gmx:100818326 927.161