Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10028g00004 ATGGAGTCAGATCTTCAGCAGCACCCTCCCATGTTTTTGGATCAGCAGCAGCAGATGAATTCGGGGTTGACACGGTACCGATCGGCTCCGAGTTCGTATTTTTCGAACATCATTGACCGTGAGTTCTATGAACACGTTTTCAATCGCCCCTCTAGCCCCGAAACAGAGCGAATGTTGACACGCTTTGTCAATAGTCTTGGTGGTGATGCAGAGGATTCACCTGTTACTCAGAATCCCCCAACCGTTGTTGCAGTTAAAGAAGAGATTAATCCGCAACCTCAGGATGTGCCATCCGTCAATAACCAACCCCTGCTTCTGCACCAACAACACCAAAGTAATATTAATAATTATGCTTCTTCTGCTCCTCAGAATTTTTACCAAAACACTGGACGACCACCTTTGCCCAACCAGATGAGAACTGGTCGTGGAACTACTTCCAATCTTATCAGGCATGGTAGCTCACCTGCTGGATTGTTTTCAAACATTAACATTGAAACTGGCTATGCTACTGTAAGAGGCATGGGAACTATGGGAGCTGTGAATAACACTAGCGAGGAAGCAAACTTTTCGCCCGCAACAAGGATCAAGAATGCACCAAACTACACTTCGGGACTAATGTCATCAAGGGCTGAAATTGGGAACAAGAGCAGCAACACACAGAATAATGTAGAAAATGAAGGGTTTGCCGAAAGCCAGGGTAATGACTTCATCCCTGGTTTTCCTGTTGGTCCATGGGATGATTCTAAAATCGTGTCTGACAATATCACTGGCCTAAAAAGATATCGAGATGATGATGTAAAACCATTTTCTGGTTTAAATGCATCTGAAAGTCAGAATGAAACAGGACCTTTGGCTCATCAATTGAGTCTGCCAAATACTTCTGCAGAAATGGCAGCCATTGAGAAGTTTCTGCAGCTCTCAGATTCTGTTCCTTGCAAAATTCGTGCCAAGCGGGGCTGTGCCACTCACCCAAGAAGCATTGCAGAGAGGGTTAGAAGAACTAAAATTAGTGAGCGAATGAGGAAACTTCAAGATCTCGTCCCGAACATGGATAAGCAAACAAACACAGCAGACATGTTGGACTTGGCTGTTGAGTACATTAAAGACCTTCAAAAGCAAGTTCAGATAATCGCGCTAAGTGTACGTGTTCGCACAAGCAGCAGCAATAACGGAAAAGAGGGAGGATGCCAGCGTCATTCCGTGTACAGCTTA 1212 0.448 MESDLQQHPPMFLDQQQQMNSGLTRYRSAPSSYFSNIIDREFYEHVFNRPSSPETERMLTRFVNSLGGDAEDSPVTQNPPTVVAVKEEINPQPQDVPSVNNQPLLLHQQHQSNINNYASSAPQNFYQNTGRPPLPNQMRTGRGTTSNLIRHGSSPAGLFSNINIETGYATVRGMGTMGAVNNTSEEANFSPATRIKNAPNYTSGLMSSRAEIGNKSSNTQNNVENEGFAESQGNDFIPGFPVGPWDDSKIVSDNITGLKRYRDDDVKPFSGLNASESQNETGPLAHQLSLPNTSAEMAAIEKFLQLSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQKQVQIIALSVRVRTSSSNNGKEGGCQRHSVYSL 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10028g00004 404 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 320 370 IPR011598 GO:0046983
Mupr10028g00004 404 Pfam Helix-loop-helix DNA-binding domain 325 371 IPR011598 GO:0046983
Mupr10028g00004 404 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 29 386 - -
Mupr10028g00004 404 SMART finulus 326 376 IPR011598 GO:0046983
Mupr10028g00004 404 Gene3D - 321 389 IPR036638 GO:0046983
Mupr10028g00004 404 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 323 377 IPR036638 GO:0046983
Mupr10028g00004 404 FunFam Transcription factor bHLH130 family 321 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10028g00004 Mupr-Chr10028 27703 30580 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10028g00004 1 388 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 41.388 3.25e-75 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr10028g00004 HLH 4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10028g00004 - - gmx:100803833 620.157