Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1000g00002 ATGACACCTGGTTACGAATACGATATTAATGATCTGCATCAAGAAGCTCAAGCCAGATGGCTGAAGCCTGCAGAAGTGATGTACATTTTACAGAATCATGAAAAGTTCCAGTTCACCCAAGAGCCCCCGCAACAGCCAACCAGTGGATCCCTGTTTCTGTTTAACAAAAGAGTCCTGCGTTTCTTCCGCAGAGATGGTCATAACTGGCGCAAGAAAAGAGATGGAAGAACTGTGGGCGAAGCACACGAACGGCTGAAGGTTGGAAATGTTGAAGCCTTAAATTGTTACTATGCACATGGAGAGCAGAGCCCTAATTTCCAGAGGCGGAGCTATTGGATGTTGGATCCGGCATATGAGCATATTGTTCTTGTGCATTATAGAGACACAAATGAGGGAAGGCTTGGTTCTGGAGCTGGAGCACAATTGTCACCAAGTTCCTCTTCTGCCTTTAGTCAGAGTCCTAGCCCATATTCTACTCAGAATCCAGGGTCAACATCCATACTTGGTGATACATATGAACCTAATCAGAGTTTCTCCAGTCCTGGATCTGCAGAAATTACCTCTGATGTATTCACTCTGAATAATGAAAAGGATCACATGGATGGAACAGATGCAGAATCAGGAACCTCAACTGAACTTGAGGTTACTCAAGCTTTGCGCCGATTGGAGGAGCAGTTAAGTTTGAATGAGAACAACTTTGAAGAAATTGCTCCCTTCTTGAACAATCATGAAACTGCACATGATTCAAACCCTCAGCACAATCAAAGGGTGATCAGCAGTCAAGAGCAATCTGCAGCTTTCTCTGGACCAGATGATCAAGGGCTATTTTATGATGGATATAATGAAAGGCAAGGTGATGGTGGTGAATGTTATCATGAATTAATAGCCCGTGGTTACCCTGATGGAAATGAAAAGGCTATATGGACAGAGGTGCTGGAATCATGTAATTCTTCTTCTGCAGGCAAGTTACCACAGAAAAATGTATACATGCCAGCTGGAAATGAAAATTCAGTATCTTCTTCAAGAAGGGTACCAGTTGCCAACCAGGAAAACAGTCACTGGCTAAACTTCAACAGTAATAATGCTGAAAACTGTATGATTTACTTTCACCTGGTTAACTTAACATTTTTAGCATATTTTGGAGTTTCTTCAACTTCTGATTCCCCTCCCATGTTAGCAGCTGTTTTATCACCACCTCATGGTGTTGATGGAGTCAAATTTCCTGCATATACTATGGTGGAAACACGGGAAATTAATTCTGACTATTATGAAACATTGTTTGATCAAAGCCAAATTGGAGCACCTCCAGATGCAGATTCAAGCTTGACTGTTGCACAAAAACAGAAATTTACTATTAAGGCAGTCTCCCCAGAATGGGGTTACGCCACTGAGACTACTAAGGTCATCATTGTTGGGTCTTTCCTCTGTCATCCCTCGGATTCTGCCTGGGCATGTATGCTTGGTGATGTTGAAGTTCCCGTTGAGATAATTCAGGATGGTGTAATCTGTTGTGAAGCTCCATCTCACCTTCCTGGAAAGGTCACTCTGTGCATTACTTCTGGAAACCGTGAATCCTGCAGTGAAGTCAGAGAGTTTGAATATTGTAACAAGACCAATAGTTGCACCCGATGTACTCAATCGGAAACAGAAGCCACTAGAAGTCCAGAAGAGCTGTTATTACTTGTTAGATTAGGGCAGATGCTTCTTTCTTCATCCACAATGAAGAATGACAACATAGAATCTGGAGTTCCTCTCATAAAACAGAAAGCTGATGAAGATTCATGGAGCCATATTATAGAGACTCTTCTAGTTGGCAGTGGAACATCGTCCAGTACTATTGATTGGCTTCTTGAAGAGCTTCTAAAGGATAAGCTGCAACAGTGGCTTTTTTGCAGATCTCTGGAAAGAGATCAAGAGACAGGGTGTTCTTTGTCCAAGAAAGAGCAGGGGATTATTCACATGGTCGCTGGGTTGGGTTTTGAGTGGGCCTTGAACCCTATTCTCAGTTGTGGAGGGAACATAAATTTCCGTGACATCAATGGGTGGACTGCCCTTCATTGGGCTGCACGTTTTGGAAGGGAAAAAATGGTTGCTTCACTTATAGCTTCTGGAGCATCTGCTGGAGCTGTGACAGATCCAAGTGCACAAGATCCAATTGGTAAAACCGCTGCATCTATTGCAGCCAGCAGTGGGCACAAGGGACTGGCAGGGTATCTTTCCGAGGTAGCTGTAACAAGCCATCTGTCATCGCTTATTCTGGAAGAGAGTGAGCTATCTAAAAGTTCTGCAGAGCTTCAGGCACATATGACTGTTAGCTGTGTCTTCGAGAAAAATCTTGCTGCCAGTGAGGATCAGGCATCACTCAAAGACACCTTGGCTGCTATCAGAAATGTAACTCAGGCAGCTGCGCGGATACAATCTGCCTTTCGCTCACATTCATTTAGAAAACGGAGATCGAAAGAAGCAGCTGCTGGTATAGATGGATATGGCACCAGTGCGGTTGGAATTGGTAGCATTCCAGAGATTTCTGCTATGTCAAAACTTGCCTTTCGGAACTCACGAGATTATAATTCAGCTGCTTTATCAATTCAGAAGAAATATCGAGGTTGGAAAGGTCGCAAAGATTTCTTATCGTTGCGCCAAAAAGTAGTGAAGATACAGGCTCATGTGAGGGGCTACCAGGTTAGGAAGCATTACAAGGTAATATGGGCAGTTGGAATCTTGGACAAGGTTGTGCTACGATGGAGGAGAAAAGGAGCTGGTTTACGAGGTTTCCGACAAGAGATGGATATTAATGAAAATGAAGATGAAGAAGAAGATATTCTCAAGGTGTTCCGAAAACAGAAAGTGGATGTAGAAATTGATGAGGCTGTTTCACGGGTGCTGTCCATGGTCGACTCACCGGATGCTCGTGACCAATATCATCGCATGCTTGAGAAATATCGTCAAGCTAAGGCTGAACTTGCGGGTACCAGTGACCAAGCGTCCTTATCAACTACTGTTCGAATAACAAACTGCTCCCATAGTAACGAAGCTGTGGACCACGTAAAGGGTCCCAACGACTGA 3066 0.4367 MTPGYEYDINDLHQEAQARWLKPAEVMYILQNHEKFQFTQEPPQQPTSGSLFLFNKRVLRFFRRDGHNWRKKRDGRTVGEAHERLKVGNVEALNCYYAHGEQSPNFQRRSYWMLDPAYEHIVLVHYRDTNEGRLGSGAGAQLSPSSSSAFSQSPSPYSTQNPGSTSILGDTYEPNQSFSSPGSAEITSDVFTLNNEKDHMDGTDAESGTSTELEVTQALRRLEEQLSLNENNFEEIAPFLNNHETAHDSNPQHNQRVISSQEQSAAFSGPDDQGLFYDGYNERQGDGGECYHELIARGYPDGNEKAIWTEVLESCNSSSAGKLPQKNVYMPAGNENSVSSSRRVPVANQENSHWLNFNSNNAENCMIYFHLVNLTFLAYFGVSSTSDSPPMLAAVLSPPHGVDGVKFPAYTMVETREINSDYYETLFDQSQIGAPPDADSSLTVAQKQKFTIKAVSPEWGYATETTKVIIVGSFLCHPSDSAWACMLGDVEVPVEIIQDGVICCEAPSHLPGKVTLCITSGNRESCSEVREFEYCNKTNSCTRCTQSETEATRSPEELLLLVRLGQMLLSSSTMKNDNIESGVPLIKQKADEDSWSHIIETLLVGSGTSSSTIDWLLEELLKDKLQQWLFCRSLERDQETGCSLSKKEQGIIHMVAGLGFEWALNPILSCGGNINFRDINGWTALHWAARFGREKMVASLIASGASAGAVTDPSAQDPIGKTAASIAASSGHKGLAGYLSEVAVTSHLSSLILEESELSKSSAELQAHMTVSCVFEKNLAASEDQASLKDTLAAIRNVTQAAARIQSAFRSHSFRKRRSKEAAAGIDGYGTSAVGIGSIPEISAMSKLAFRNSRDYNSAALSIQKKYRGWKGRKDFLSLRQKVVKIQAHVRGYQVRKHYKVIWAVGILDKVVLRWRRKGAGLRGFRQEMDINENEDEEEDILKVFRKQKVDVEIDEAVSRVLSMVDSPDARDQYHRMLEKYRQAKAELAGTSDQASLSTTVRITNCSHSNEAVDHVKGPND 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1000g00002 1021 FunFam Calmodulin-binding transcription activator 2 855 903 - -
Mupr1000g00002 1021 Pfam IPT/TIG domain 451 534 IPR002909 -
Mupr1000g00002 1021 SMART ANK_2a 680 709 IPR002110 GO:0005515
Mupr1000g00002 1021 SMART ANK_2a 719 748 IPR002110 GO:0005515
Mupr1000g00002 1021 ProSiteProfiles IQ motif profile. 856 885 IPR000048 GO:0005515
Mupr1000g00002 1021 SMART CG_1_2 12 130 IPR005559 GO:0003677
Mupr1000g00002 1021 CDD IPT 451 534 - -
Mupr1000g00002 1021 FunFam Calmodulin-binding transcription activator 2 445 538 - -
Mupr1000g00002 1021 SUPERFAMILY Ankyrin repeat 649 742 IPR036770 -
Mupr1000g00002 1021 Gene3D - 856 904 - -
Mupr1000g00002 1021 MobiDBLite consensus disorder prediction 243 268 - -
Mupr1000g00002 1021 Gene3D Immunoglobulins 445 540 IPR013783 -
Mupr1000g00002 1021 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 847 902 IPR027417 -
Mupr1000g00002 1021 MobiDBLite consensus disorder prediction 135 185 - -
Mupr1000g00002 1021 FunFam Calmodulin-binding transcription activator 4 isoform A 561 745 - -
Mupr1000g00002 1021 ProSiteProfiles IQ motif profile. 879 904 IPR000048 GO:0005515
Mupr1000g00002 1021 ProSiteProfiles Ankyrin repeat region circular profile. 680 706 - -
Mupr1000g00002 1021 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 8 987 - -
Mupr1000g00002 1021 Gene3D - 574 745 IPR036770 -
Mupr1000g00002 1021 Pfam Ankyrin repeats (3 copies) 662 740 IPR002110 GO:0005515
Mupr1000g00002 1021 ProSiteProfiles IQ motif profile. 799 824 IPR000048 GO:0005515
Mupr1000g00002 1021 Pfam IQ calmodulin-binding motif 881 900 IPR000048 GO:0005515
Mupr1000g00002 1021 Pfam IQ calmodulin-binding motif 858 876 IPR000048 GO:0005515
Mupr1000g00002 1021 SUPERFAMILY E set domains 451 534 IPR014756 -
Mupr1000g00002 1021 Pfam CG-1 domain 15 128 IPR005559 GO:0003677
Mupr1000g00002 1021 ProSiteProfiles CG-1 DNA-binding domain profile. 9 135 IPR005559 GO:0003677
Mupr1000g00002 1021 ProSiteProfiles Ankyrin repeat profile. 680 712 IPR002110 GO:0005515
Mupr1000g00002 1021 SMART iq_5 855 877 IPR000048 GO:0005515
Mupr1000g00002 1021 SMART iq_5 878 900 IPR000048 GO:0005515
Mupr1000g00002 1021 SMART iq_5 797 819 IPR000048 GO:0005515
Mupr1000g00002 1021 MobiDBLite consensus disorder prediction 139 185 - -
Mupr1000g00002 1021 MobiDBLite consensus disorder prediction 243 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1000g00002 Mupr-Chr1000 4359 13115 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1000g00002 5 991 CAMTA Transcription Factor Family AT1G67310 51.404 0.0 916
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Mupr1000g00002 CG-1 1.2e-48 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1000g00002 K21596 - gmx:100786880 1609.35