Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10001g00001 ATGGCTTTTTGGGGAGTGGAAGTAAAACCGGGAAAGCCTTTTACTCATAAATACGAGTACTCGAAAGGACGCCTCCATATTTCAATGGTAATGTTGCTGAGAAATGCCACTTTGGGGCTGGGCACTTCAACTGCAAAAAGCACACTGCAGTGCAATGTGGGAAAGAGGAGCCCTGTATATCTATGTTCTCTCTATCCTGGAAACACCGAGTCATTGCAATTAAATTTAGAGCTTGAGGAAGTTGACCAAGTTGTTCTCTCTGTAATTGGCCCTCGTAGCATTCATCTATGCGGTTACTATCTTGCCACTGCCCGCAATACCAATGTTTTCTTTTTCTTATTTTCCTTCACTACAATGGAAAGGGAATCTTATGGGGAGGATATTGCAGATACAGAAACAGAGAGATCTGATTACAATGAGGAAGATGATGAGTATGATGATAGTTTTATTGACGACGATGAGAAAGCTTCTCATGATAATAGACCAAAAGGTAGGAAAGGCAGCCTTCGACGGCTTAGGAAGAAGTACCAGTTAGTAGAGTCTGATGATGATGGCTGTTACGAACAAAAGATAATTGCCAATGACAGTATACATGACCAAACCAAGGAAATTGAAAACGAAGATAACCTACCTATTTTGTCCCTTTGCAAGAATAAAGCTTCTGGAAGGGTCTTGGACCAGGAAATGGATGCTAGTGTTGACAGAGGAGCAGGTGATGCCAGCAACAAAAATGGTGGAAAGAGTATTGCTGAAACAAATTTAAAAGCTGACTATGTCATTGTAGATAGTCAGACTCACAGGGAAGCTGAACCACCGCACCAATTGGTAGATCCTTGCGCTGTTCTGGATGTTGGGGATATTAAAAATTCTAAAAAGAAAAAGAAGAGAAAGGAAAAAGAGACAAAGAGCTCCTGTAATGACCATTCTATCAAACTAGATAATGGTATAGGAGGTGAACCAAAAATGGAAAAGATGACCCAGGATTTTGTGGCAGGAAATAAACAACAGCAGCATGCTGATGATAAGGAAACTGAAACCATGGATAAAATACTACCTTCTTCTCAGGTTGATCAAGGACAGGGTGAAAAGCCAAAGAAGAAAAGGAAAGAACGGTCTGAGGGGGTGCTTTCGGTTGCTACTGATAACAATCTTGTTAATCTGTCTCAGAGCAATGAACACAATAAACAGCACACACAAATTAGCAGGGATGTTAATATTTCAGACAATGTTGCATTGCCTTCTGCTGAGACGGATCCTAAAAAGAGTAGAACAAAGAGGAAAAAGAAAGAACAGGTAAACAAAAGTAACAATGGATATCATGAAGATATCATCCAAGAGGACAAAGCCAACAGAAATGCAGAAGAGTCCCAGAATCTGATTCATAATTTTTTTGAAGAAAAAGAGCAGCATCAGAAGCTAACTAATGATAAGAGTGTGGACAATGATGCTCATGACATTCCTGATGGAAATCAACCTGAGGATAGAAAAGTTAAGAGAAGGAAGAAAATGAGTAAAAGTCGGGGCAATGGGGAAGTTGTAAATTCTGATGTGCCTGTATCTGTTGAGCAAAGTGGTGAGACTGAGATGATGGAGGAGGACAGAAATAAGAGGGAAGATGCAAAGCCTTCCCAAGTTAGAACGTTCTCAAATGGACTACTTATTCAAGAACTAGAGAAGGGGATAAAAGAGGGCAAAATTGCTGCTTCGGGGAAAAAGATCAGCATCTATTACACTGGCAAGTTGAAGGAAAATGGAGTAGTGGTCGAGTCAAATGCTGGCCAAGCTCCTTTCAAATTTCGCCTTGGTAAGGGAGAGGTTATCAAGGGTTGGGATGTCGGCCTTGAAGGTGGCATGCAAGTTGGAGAGAAGAGAAGACTTGTAATTCCACCATCAATGACGTCTGAGAGTGATGGACACAGTGCCAAAATACCACCAAATTCATGGTTGGTTTATGACTTCGAACTGGTTAAAGTTCATTGA 1980 0.4086 MAFWGVEVKPGKPFTHKYEYSKGRLHISMVMLLRNATLGLGTSTAKSTLQCNVGKRSPVYLCSLYPGNTESLQLNLELEEVDQVVLSVIGPRSIHLCGYYLATARNTNVFFFLFSFTTMERESYGEDIADTETERSDYNEEDDEYDDSFIDDDEKASHDNRPKGRKGSLRRLRKKYQLVESDDDGCYEQKIIANDSIHDQTKEIENEDNLPILSLCKNKASGRVLDQEMDASVDRGAGDASNKNGGKSIAETNLKADYVIVDSQTHREAEPPHQLVDPCAVLDVGDIKNSKKKKKRKEKETKSSCNDHSIKLDNGIGGEPKMEKMTQDFVAGNKQQQHADDKETETMDKILPSSQVDQGQGEKPKKKRKERSEGVLSVATDNNLVNLSQSNEHNKQHTQISRDVNISDNVALPSAETDPKKSRTKRKKKEQVNKSNNGYHEDIIQEDKANRNAEESQNLIHNFFEEKEQHQKLTNDKSVDNDAHDIPDGNQPEDRKVKRRKKMSKSRGNGEVVNSDVPVSVEQSGETEMMEEDRNKREDAKPSQVRTFSNGLLIQELEKGIKEGKIAASGKKISIYYTGKLKENGVVVESNAGQAPFKFRLGKGEVIKGWDVGLEGGMQVGEKRRLVIPPSMTSESDGHSAKIPPNSWLVYDFELVKVH 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10001g00001 659 MobiDBLite consensus disorder prediction 125 168 - -
Mupr10001g00001 659 MobiDBLite consensus disorder prediction 508 522 - -
Mupr10001g00001 659 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 47 374 - -
Mupr10001g00001 659 MobiDBLite consensus disorder prediction 468 497 - -
Mupr10001g00001 659 Coils Coil 121 141 - -
Mupr10001g00001 659 MobiDBLite consensus disorder prediction 431 447 - -
Mupr10001g00001 659 MobiDBLite consensus disorder prediction 468 544 - -
Mupr10001g00001 659 MobiDBLite consensus disorder prediction 376 412 - -
Mupr10001g00001 659 MobiDBLite consensus disorder prediction 287 447 - -
Mupr10001g00001 659 SUPERFAMILY FKBP-like 522 658 - -
Mupr10001g00001 659 Pfam Nucleoplasmin-like domain 3 101 IPR041232 -
Mupr10001g00001 659 MobiDBLite consensus disorder prediction 527 543 - -
Mupr10001g00001 659 Gene3D - 519 659 IPR046357 GO:0003755
Mupr10001g00001 659 MobiDBLite consensus disorder prediction 133 150 - -
Mupr10001g00001 659 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 566 656 IPR001179 GO:0003755
Mupr10001g00001 659 Gene3D Nucleoplasmin core domain 1 105 - -
Mupr10001g00001 659 MobiDBLite consensus disorder prediction 360 375 - -
Mupr10001g00001 659 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 570 659 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10001g00001 Mupr-Chr10001 1657 7533 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10001g00001 570 656 Calmodulin-binding Proteins AT5G48570 40.230 2.44e-13 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10001g00001 K14826 - gmx:100798135 790.801