Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3908 ATGGCTAAGAGATCAGATTTTGCACAGAAGCTTCTTGATGATCTGCGCGTAAGGAAAGAACGAATGGCTGTTACTGCATCTCATTCTCAAAACTCAAACCAATCCTACCATTTGCCTATAGATGCATATGGATACACCAAGCAAACCTACAGAGGGTCGACAAATACAAGAGCAAATGAGGTTAGTTCCAGAAATGGGGAGACGGTGAATTGGTCTAGCAGAAGGCAGAGATCAGTAAAGAGTGCAGGAGACTTGTCAAATCAGATTATCCCATACGGGAAAGCCTTCGACAATAATGGAGGGAAACTAGGAAGGGCCGATCTGTCTATCACCAATTCAATTCTGGGTTTCCTTCACCAGATTCAAAGGGAAGGAATGGATAGAGGAAGCAACTTGGACAGGCAACTAGCTTCAACTAGCCATACCCTCTCTCTTGTACAGATAAATGAGATATCCAAAGGTGCACAGAAGCTAAACCACGTATTGAGAGCTTGCTGCTCCAATGGTGTCAACATGGATACATATTCATTAACTTTTGCAAAGGAACTATTACAAGGAGCTATTGATTTGGAAGAGTCGCTCGGAATACTAGTGGATCTGCAGAAAAGTTCAGAGTTTATGATTACCTCGCAAGCACAGAACAAAAATCGAATCACACTATTAGAGGAGGAGGAGGAGGAGGAGGAGGTAGAAGATGAGAGGAGGAGGGTGGAGAAAATACAACTGGCACGTCCAACTTTCTCGGTTGACAACAAGATGCAGAGAGCAATTACAATCACCAACTCTAAGGAAACCAAAAAGATAAAAGATTCTCAGCGGAAGCGAACATCAACTAACACTGGCAGAGCTGCCGACATTTCAAACCAGATGGCCGACAAGGGAAGGATTCCAAACGTAATAGCCAAACTAATGGGACTGGACAACCTTCCTGAGAAGAAGGTTTCTGGTAATTGTAATACTGCATCATCCAAACACTCTGCCAAAGGAAGCAGCAGCACCACACTGAAGAGCAAACAAACAGACAATTTGATCAAAAACCAAAAAGTGGCTGTTGGATCCTTCAAAACCATGATGTTTGGTGGTCCAGATAAAAATTTGGTCCTCCAAAACCAAAAGTCTGCCTATTACTCTGAATCTGAGGTGGTTGGAATAAAAGCATTGAAGGGCTTTGACAAGGCCAGCATCATCAACTATTCTGCTCGTCAAAATTATGTTGAGGTGCTGATGGGAAGGAAACAGGATCACCCACATAACAGTGGCACAGTAAAGGACAGAAGCATAAATGGCAATGATCCATTTCATAATCTAAATAACATGCACGAAAGAAGATCACAAGTTAAACCTGCCATTCAAATTGCAAAAGAAGGACAAACAATCACAGACAAGCATATTAAGATGAGCAATGAAAAGAAGTCTCGGGACCATATCGTGGTTCAAAAGTCAATTATCTCCAAAGACGGAGGGAGAGAAATGACACCCAGGAATTCATCAAAACAATCCACCATTAATCTTCAGAAGAAGAAGAAGCAATCATTCATAAACCAACCCACACCGTTCAAGATATCACGTGGTGATCTAGATATAGTCGCATCTAATGAGAAAGTAAAAGAAATTATTAAAAGAAAGAAGTCCTCCCCAAGATATCAAGAATTTCAACGAGCTAATGGAACACAAACACTAAAAGATCATAAATTCATGGACAGCAAGAAAATAAAGCCTGAAAAGATTGAACAAATGTTGAGTAGAAGAAATGAACAAGAAGCTAGTGGTAGAGCATCTGGAAAATTGAATGTCTTAAATGGAGCAGACCAAAAAAGGTTTAGCATATTCACAGAACATGAACTGCTTCCTACTTCTACGTTGTACAATTCTGGCAAGAGTGAAGATTTACAAGAATCGGCCAATGATTTGCAATACCAAGCTGTGCAACCGATAGGAACCAATTTGCAAGATCAAGCTGTTCCTGAGGCAGCACATGAGGGATTCAAGACCAGTGAAGTTGCATACCATAAAAGAAAAACAATTGGAGTTCAGGAAGGCAGAATGGGTGTGAAACAACAAAATCAAAATATGAGCATCCAACAACCACTAACAGAAAGTGAAAACCACCTCAAGTGGATTTTGGTCACGAGTCAATTATTCGTCAACACTGCAGAAGCACTTTTCAGACTAAACATCCCGTTCGGTATTCTTCAAGGTAATCATCAAGACAGTCAAGACCAACGTAGCAAGCTGATATTAGATTGCGGCTATGAAGTGATGAAAAGAAAGGGGATACGGCAGGAACTCAAAGTTCATACTTGTTCAAAAATATCATCAATCACTAGTACTGTTAACTTGATAAGATCTCTAGATGACTTGGTTAAGAAGCTGAACGAGGACATGGAGAAGATTAAATTCTACGGAAGGAAAAAGAGTAGCAAAGTTGATGTTGAGGACTACCTGCCTAAGATGCTTGAGCATGATATCTATGAAAAATGGCCTGACATAGATTGCATGTGGGATTTAGGTTGGAATGATGAGACATCTGCATTTATCGAAAAATATGATGTTATAAGGGATACAGAAAAGCATATCCTTAGTATACTTCTGGATGAGATCGCCAAAGAATATTGCACATTCAAGGAGCGCTGA 2634 0.4043 MAKRSDFAQKLLDDLRVRKERMAVTASHSQNSNQSYHLPIDAYGYTKQTYRGSTNTRANEVSSRNGETVNWSSRRQRSVKSAGDLSNQIIPYGKAFDNNGGKLGRADLSITNSILGFLHQIQREGMDRGSNLDRQLASTSHTLSLVQINEISKGAQKLNHVLRACCSNGVNMDTYSLTFAKELLQGAIDLEESLGILVDLQKSSEFMITSQAQNKNRITLLEEEEEEEEVEDERRRVEKIQLARPTFSVDNKMQRAITITNSKETKKIKDSQRKRTSTNTGRAADISNQMADKGRIPNVIAKLMGLDNLPEKKVSGNCNTASSKHSAKGSSSTTLKSKQTDNLIKNQKVAVGSFKTMMFGGPDKNLVLQNQKSAYYSESEVVGIKALKGFDKASIINYSARQNYVEVLMGRKQDHPHNSGTVKDRSINGNDPFHNLNNMHERRSQVKPAIQIAKEGQTITDKHIKMSNEKKSRDHIVVQKSIISKDGGREMTPRNSSKQSTINLQKKKKQSFINQPTPFKISRGDLDIVASNEKVKEIIKRKKSSPRYQEFQRANGTQTLKDHKFMDSKKIKPEKIEQMLSRRNEQEASGRASGKLNVLNGADQKRFSIFTEHELLPTSTLYNSGKSEDLQESANDLQYQAVQPIGTNLQDQAVPEAAHEGFKTSEVAYHKRKTIGVQEGRMGVKQQNQNMSIQQPLTESENHLKWILVTSQLFVNTAEALFRLNIPFGILQGNHQDSQDQRSKLILDCGYEVMKRKGIRQELKVHTCSKISSITSTVNLIRSLDDLVKKLNEDMEKIKFYGRKKSSKVDVEDYLPKMLEHDIYEKWPDIDCMWDLGWNDETSAFIEKYDVIRDTEKHILSILLDEIAKEYCTFKER* 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3908 877 MobiDBLite consensus disorder prediction 262 286 - -
Mtr8g3908 877 MobiDBLite consensus disorder prediction 313 340 - -
Mtr8g3908 877 MobiDBLite consensus disorder prediction 493 511 - -
Mtr8g3908 877 MobiDBLite consensus disorder prediction 262 276 - -
Mtr8g3908 877 Coils Coil 220 243 - -
Mtr8g3908 877 PANTHER OS01G0228800 PROTEIN-RELATED 1 872 - -
Mtr8g3908 877 MobiDBLite consensus disorder prediction 486 511 - -
Mtr8g3908 877 Pfam DUF761-associated sequence motif 295 315 IPR032795 -
Mtr8g3908 877 PANTHER EXPRESSED PROTEIN 1 872 - -
Mtr8g3908 877 MobiDBLite consensus disorder prediction 53 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3908 Mtr-Chr8 49683395 49687471 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3908 647 870 TRM (TON1 Recruiting Motif) Superfamily AT5G42710 38.197 2.49e-36 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3908 - - mtr:MTR_8g107730 1705.26