Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr8g3883 | ATGGCGGCGGCGATTCAGGCTGAACCGGCGAAGCTAAGGTGGGGAGAATTGGAGGAAGACGATGGCGAAGATCTGGATTTCCTGTTACCACCACGTCAGGTGATAGGTCCTGATGAAAATGGAATCAAAAGGGTTATTGAATACAAATTCGATGATGATGGTAATAAGGTTAAGATCACTACAACCACTCGCACCCGCAAACTTGCCAATGCGCGTCTCAGCAAACGCGCCGTTGAGCGCCGTTCCTGGCCTAAATTCGGAGACGCCGTTCATGAAGACGTCGGTGCCCGCCTCACTATGGTCTCCACCGAAGAGATCCTTCTCGAACGCCCCAAACCACTTGGTTCCAACAAGGAGGATCCAAAGACTGCTGACCCACTCTCTCAATTCAATAAAGGTGCTGTTCTTATGGTATGCAGGACCTGCGGGAAGAAGGGTGATCATTGGACTTCAAGGTGTCCATATAAGGATCTCGCACAGCCTCCTGAGACTTTTGTTGATAAACCTGTTGCGACAGATGCTGCTCCTGGGGCTTCAGCTGGCTCAGCAAAGGGTGCATATGTACCTCCTAGTCTGAGAGCTGGTGCCGAGAGGACTACTGGCTCTGACATGAGGCGGAGGAACGATGAGAATTCTGTTCGGGTAACCAACCTCTCTGAGGACACAAGGGAACCAGATTTGCTCGAGCTTTTCCGGCCTTTTGGTGCTGTCAGTAGGGTCTATGTTGCTATTGATCAAAAGACTGGCATGAGTAGGGGCTTTGGCTTTGTCAACTTTGTTAGCAGGGAAGATGCTCAGAGGGCTATCAACAAACTCAATGGATATGGCTACGATAATCTCATCCTAAGAGTTGAATGGGCCACCCCAAGAACAACCTAA | 879 | 0.5017 | MAAAIQAEPAKLRWGELEEDDGEDLDFLLPPRQVIGPDENGIKRVIEYKFDDDGNKVKITTTTRTRKLANARLSKRAVERRSWPKFGDAVHEDVGARLTMVSTEEILLERPKPLGSNKEDPKTADPLSQFNKGAVLMVCRTCGKKGDHWTSRCPYKDLAQPPETFVDKPVATDAAPGASAGSAKGAYVPPSLRAGAERTTGSDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAIDQKTGMSRGFGFVNFVSREDAQRAINKLNGYGYDNLILRVEWATPRTT* | 293 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr8g3883 | 292 | Pfam | Eukaryotic translation initiation factor 3 subunit G | 33 | 158 | IPR024675 | - | |
Mtr8g3883 | 292 | PIRSF | Transl_init_eIF-3_RNA-bind | 3 | 292 | IPR017334 | GO:0003743|GO:0005737|GO:0005852 | |
Mtr8g3883 | 292 | Hamap | Eukaryotic translation initiation factor 3 subunit G [EIF3G]. | 11 | 291 | IPR017334 | GO:0003743|GO:0005737|GO:0005852 | |
Mtr8g3883 | 292 | CDD | RRM_eIF3G_like | 212 | 287 | IPR034240 | - | |
Mtr8g3883 | 292 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G | 9 | 292 | - | - | |
Mtr8g3883 | 292 | SUPERFAMILY | RNA-binding domain, RBD | 200 | 291 | IPR035979 | GO:0003676 | |
Mtr8g3883 | 292 | SMART | rrm1_1 | 212 | 285 | IPR000504 | GO:0003723 | |
Mtr8g3883 | 292 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 213 | 279 | IPR000504 | GO:0003723 | |
Mtr8g3883 | 292 | Gene3D | - | 175 | 292 | IPR012677 | - | |
Mtr8g3883 | 292 | MobiDBLite | consensus disorder prediction | 172 | 212 | - | - | |
Mtr8g3883 | 292 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 211 | 289 | IPR000504 | GO:0003723 | |
Mtr8g3883 | 292 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G | 9 | 292 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr8g3883 | Mtr-Chr8 | 49474655 | 49476060 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr8g3883 | 1 | 292 | Eukaryotic Initiation Factors Gene Family | AT3G11400 | 67.183 | 3.79e-152 | 426 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr8g3883 | K03248 | - | gmx:100818725 | 506.908 |