Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3880 ATGGTTAAATCATCAGAATCAGAATCAGAATCAGAATCATTTTCAAAGGATTTTGTAATGGCAGGAGCAGCAGCAATCATATCTAAAACTGCAGTGGCACCAATTGAGAGAGTGAAGCTTTTATTACAAAACCAAAGCGAAATGATTAAAAGAGGAAATCTCAAAACACCATACCTTGGTTTGTCTAATACCTTTAATAGAGTCTTTGCTCAAGAGGGTCTCCTTGCCTTTTGGAGAGGTCACCAGGCCAATGTTATTAGATATTTTCCCACGCAGGCTTTCAATTTTGCATTCAAAGGTTACTTCAAAACCGTCTTTGGATTTTCCAGAGACAAAGACGGCTACATCAAGTGGTTTGCTGGCAATGTGGCTTCAGGCAGTGCTGCCGGTGCTACTACCTCAATACTTTTGTATCATTTGGACTTTGCACGTACAAGATTGGCCACTGATTCACTTGAGTGCCGTGCCACTGGTCACCGTCAGTTTAAAGGACTCATTCATGTATATCGTAAAACAATATCAACTGATGGTTTTGCTGGCTTGTACAGGGGTTTCGGTGTTTCAATATTTGGAATCACCATGTATCGAGGAATGTACTTTGGGATATATGACACCATGAAGCCTATTCTTTTAGTTGGCCCTTTTGAGGGGAACTTCTTTGCTAGTTTCTTTTTAGGTTGGAGCATCACAACTGTATCTGGTGTCTGTGCATATCCTTTTGACACATTACGCCGGCGTATGATGCTAACTTCCGGACACCAAAACAAATATTATAATTCAATGCATGCATTCCGTGAGATTGTTGGACAAGAGGGTTTCTTAGCTCTATTTCGAGGAGTCACTGCAAACATGCTTCTAGGGATGGCGGGAGCTGGGGTGCTTGCTGGGTACGATCAGCTAAACCGTATCTCATCTAGACACAGTAACTGTAATGAAACGAACCAAAGATTATGA 954 0.4151 MVKSSESESESESFSKDFVMAGAAAIISKTAVAPIERVKLLLQNQSEMIKRGNLKTPYLGLSNTFNRVFAQEGLLAFWRGHQANVIRYFPTQAFNFAFKGYFKTVFGFSRDKDGYIKWFAGNVASGSAAGATTSILLYHLDFARTRLATDSLECRATGHRQFKGLIHVYRKTISTDGFAGLYRGFGVSIFGITMYRGMYFGIYDTMKPILLVGPFEGNFFASFFLGWSITTVSGVCAYPFDTLRRRMMLTSGHQNKYYNSMHAFREIVGQEGFLALFRGVTANMLLGMAGAGVLAGYDQLNRISSRHSNCNETNQRL* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3880 317 SUPERFAMILY Mitochondrial carrier 12 300 IPR023395 -
Mtr8g3880 317 Pfam Mitochondrial carrier protein 12 107 IPR018108 -
Mtr8g3880 317 Pfam Mitochondrial carrier protein 118 210 IPR018108 -
Mtr8g3880 317 Pfam Mitochondrial carrier protein 218 303 IPR018108 -
Mtr8g3880 317 PRINTS Adenine nucleotide translocator signature 14 26 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Mtr8g3880 317 PRINTS Adenine nucleotide translocator signature 58 79 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Mtr8g3880 317 PRINTS Adenine nucleotide translocator signature 91 103 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Mtr8g3880 317 PRINTS Adenine nucleotide translocator signature 117 130 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Mtr8g3880 317 PRINTS Adenine nucleotide translocator signature 222 238 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Mtr8g3880 317 ProSiteProfiles Solute carrier (Solcar) repeat profile. 217 303 IPR018108 -
Mtr8g3880 317 PRINTS Mitochondrial carrier protein signature 17 30 IPR002067 GO:0055085
Mtr8g3880 317 PRINTS Mitochondrial carrier protein signature 30 44 IPR002067 GO:0055085
Mtr8g3880 317 PRINTS Mitochondrial carrier protein signature 80 100 IPR002067 GO:0055085
Mtr8g3880 317 PRINTS Mitochondrial carrier protein signature 132 150 IPR002067 GO:0055085
Mtr8g3880 317 PRINTS Mitochondrial carrier protein signature 182 200 IPR002067 GO:0055085
Mtr8g3880 317 PRINTS Mitochondrial carrier protein signature 226 248 IPR002067 GO:0055085
Mtr8g3880 317 ProSiteProfiles Solute carrier (Solcar) repeat profile. 12 105 IPR018108 -
Mtr8g3880 317 ProSiteProfiles Solute carrier (Solcar) repeat profile. 117 209 IPR018108 -
Mtr8g3880 317 PANTHER ADP,ATP CARRIER PROTEIN ER-ANT1 9 314 - -
Mtr8g3880 317 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 9 314 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Mtr8g3880 317 Gene3D Mitochondrial carrier domain 7 308 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3880 Mtr-Chr8 49459146 49460911 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3880 10 307 Antiporters AT5G17400 73.826 5.57e-161 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3880 K05863 - gmx:100798418 514.612